RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 RNF13O43567 381 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 AKAP8O43823 692 aaKnown RBP12.13□□□□□ -0.47
VPREB1-202ENST00000403807 PIP5K1CO60331 668 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 CIB2O75838 187 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 ADAP00813 363 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 SAGP10523 405 aaPredicted RBP12.13□□□□□ -0.47
VPREB1-202ENST00000403807 IGFBP2P18065 325 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 HMGA2P52926 109 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 CLDN17P56750 224 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 P2RY6Q15077 328 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 C1orf146Q5VVC0 180 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 NIPAL3Q6P499 406 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 Q6ZT83 130 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 TMPRSS11FQ6ZWK6 438 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.13□□□□□ -0.47
VPREB1-202ENST00000403807 ADGRG5Q8IZF4 528 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 ANKK1Q8NFD2 765 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 ALPK1Q96QP1 1244 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 CHID1Q9BWS9 393 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 YY1AP1Q9H869 796 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 GPR52Q9Y2T5 361 aa12.13□□□□□ -0.47
VPREB1-202ENST00000403807 MPDZO75970 2070 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 TRBV4-1A0A0J9YWV2 114 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 TCRBV3S1A0A5B6 114 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 SH3PXD2BA1X283 911 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 TUBAL3A6NHL2 446 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 EFCAB9A8MZ26 197 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 TNFRSF11BO00300 401 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 HPRP00739 348 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 HLA-DOBP13765 273 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 MAKP20794 623 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 UGT2B10P36537 528 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 IFNGR2P38484 337 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 KIR2DL3P43628 341 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 SLC9A3P48764 834 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPREB1-202ENST00000403807 POU3F1Q03052 451 aaPredicted RBP12.12□□□□□ -0.47
VPREB1-202ENST00000403807 ITGADQ13349 1161 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 ANKDD1AQ495B1 522 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 GABRG1Q8N1C3 465 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 LINC00471Q8N535 108 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 POMGNT2Q8NAT1 580 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 ACBD4Q8NC06 268 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 ASB6Q9NWX5 421 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 RCE1Q9Y256 329 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
VPREB1-202ENST00000403807 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 GNGT2O14610 69 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 HNRNPRO43390 633 aaKnown RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 OR10H3O60404 316 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SLC43A1O75387 559 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SERPINI2O75830 405 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 KRT33AO76009 404 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 CST1P01037 141 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 PSMB1P20618 241 aaKnown RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 EDNRAP25101 427 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 AQP2P41181 271 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SELENOPP49908 381 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 RPL18Q07020 188 aaKnown RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 FAPQ12884 760 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SNTB1Q13884 538 aaKnown RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SEC23BQ15437 767 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 TAF11Q15544 211 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SFRP5Q5T4F7 317 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 OR2T5Q6IEZ7 315 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 STAC2Q6ZMT1 411 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 ABHD12BQ7Z5M8 362 aaPredicted RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 OAFQ86UD1 273 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 OR4K5Q8NGD3 323 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 OR2T29Q8NH02 315 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 LINC01560Q8TB33 94 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 TXNDC15Q96J42 360 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 FUZQ9BT04 418 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 OR10A4Q9H209 315 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SLCO5A1Q9H2Y9 848 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 REEP1Q9H902 201 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 CCM2LQ9NUG4 571 aaPredicted RBP12.11□□□□□ -0.47
VPREB1-202ENST00000403807 HIF3AQ9Y2N7 669 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
VPREB1-202ENST00000403807 SLC35F4A4IF30 521 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
VPREB1-202ENST00000403807 ZNF432O94892 652 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 BCL10O95999 233 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 TSPAN19P0C672 248 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 IFNGR1P15260 489 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 PPP3CBP16298 524 aa12.1□□□□□ -0.47
VPREB1-202ENST00000403807 IL32P24001 234 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms