RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SLC22A6Q4U2R8 563 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 DEDD2Q8WXF8 326 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 RASD2Q96D21 266 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 WDR34Q96EX3 536 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 SORCS2Q96PQ0 1159 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 FOXQ1Q9C009 403 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 NIPAL2Q9H841 368 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 TMPRSS11EQ9UL52 423 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 GAPDHSO14556 408 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 APLNRP35414 380 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 SNRPD2P62316 118 aaKnown RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 CXADRP78310 365 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC14A1Q13336 389 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 KCNAB1Q14722 419 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 MLC1Q15049 377 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 SF3B4Q15427 424 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 NKG7Q16617 165 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 FAM219BQ5XKK7 198 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 LIX1LQ8IVB5 337 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 CCDC74AQ96AQ1 378 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 C7orf34Q96L11 122 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 MEN1O00255 615 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ADAM23O75077 832 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 UBL3O95164 117 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 TAS2R19P59542 299 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 CAMK2DQ13557 499 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZMAT1Q5H9K5 638 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 AIFM2Q9BRQ8 373 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC43A1O75387 559 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 POU2F2P09086 479 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 BIDP55957 195 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 WNT3P56703 355 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ALKBH1Q13686 389 aaKnown RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 FGFBP1Q14512 234 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 YIF1BQ5BJH7 314 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 BCORP1Q8N888 145 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 HCAR1Q9BXC0 346 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC25A19Q9HC21 320 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 TAS2R3Q9NYW6 316 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 AGAP14A8MT82 685 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 IDSB3KWA1 339 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 CLEC2LP0C7M8 214 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 P2RX1P51575 399 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 DLX5P56178 289 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 CLDN17P56750 224 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 MEP1BQ16820 701 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 TMEM53Q6P2H8 277 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 C16orf52Q8NHV5 167 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZFP57Q9NU63 452 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 KCNIP1Q9NZI2 227 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 NTNG1Q9Y2I2 539 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 SEC16AO15027 2179 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 METTL12A8MUP2 240 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ATF4P18848 351 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 RPS19P39019 145 aaKnown RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 BTG2P78543 158 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 FAM198BQ6UWH4 519 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 SYT13Q7L8C5 426 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC16A9Q7RTY1 509 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR2M2Q96R28 347 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR14A2Q96R54 314 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 ELF4Q99607 663 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 CTRCQ99895 268 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 NOX4Q9NPH5 578 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 UGT2A1Q9Y4X1 527 aa13.09□□□□□ -0.31
PCDHGA11-201ENST00000398587 LILRA5A6NI73 299 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 LMO7DNF2Z398 122 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 NARSO43776 548 aaKnown RBP13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 MRPL33O75394 65 aaKnown RBP13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 MT-ND4P03905 459 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 AAED1Q7RTV5 226 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 HMGCLL1Q8TB92 370 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 LGALS14Q8TCE9 139 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 STT3BQ8TCJ2 826 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 LRFN5Q96NI6 719 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 RPP25Q9BUL9 199 aaKnown RBP13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 NOX3Q9HBY0 568 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 FKBP14Q9NWM8 211 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 MLXQ9UH92 298 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF175Q9Y473 711 aa13.08□□□□□ -0.31
PCDHGA11-201ENST00000398587 F5H5P2 479 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 GOSR2O14653 212 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 CD46P15529 392 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms