RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 HDGFL3Q9Y3E1 203 aa11.77□□□□□ -0.52
VPS26A-203ENST00000395098 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.52
VPS26A-203ENST00000395098 ACACAQ13085 2346 aa11.77□□□□□ -0.52
VPS26A-203ENST00000395098 FREM3P0C091 2139 aa11.77□□□□□ -0.52
VPS26A-203ENST00000395098 A6NHS1 94 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 PRR23D1E9PI22 279 aaPredicted RBP11.77□□□□□ -0.53
VPS26A-203ENST00000395098 H7C1C5 153 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 SULT2B1O00204 365 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 TXNDC12O95881 172 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 PDGFAP04085 211 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 CDK1P06493 297 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 PRR23D2P0DMB1 279 aaPredicted RBP11.77□□□□□ -0.53
VPS26A-203ENST00000395098 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
VPS26A-203ENST00000395098 ZNF3P17036 446 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
VPS26A-203ENST00000395098 SDHAP31040 664 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
VPS26A-203ENST00000395098 NR1H2P55055 460 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 LCN6P62502 163 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 PMP22Q01453 160 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 EMX1Q04741 257 aaPredicted RBP11.77□□□□□ -0.53
VPS26A-203ENST00000395098 PUDPQ08623 228 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 MFSD13AQ14CX5 517 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 ACKR1Q16570 336 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 NIPAL3Q6P499 406 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 PRSS48Q7RTY5 328 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 ZNRF4Q8WWF5 429 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 B3GAT1Q9P2W7 334 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 B4GALT7Q9UBV7 327 aa11.77□□□□□ -0.53
VPS26A-203ENST00000395098 K7EM74 188 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 TNFSF11O14788 317 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 IDH3BO43837 385 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 OR6A2O95222 327 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 ADRB1P08588 477 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SLC2A5P22732 501 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SUCLG1P53597 346 aaKnown RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 CLDN15P56746 228 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SHFQ7M4L6 423 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 GGNQ86UU5 652 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 KISS1RQ969F8 398 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 LGALS12Q96DT0 336 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 RNFT2Q96EX2 444 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 OR51V1Q9H2C8 321 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SLC6A15Q9H2J7 730 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 CNOT2Q9NZN8 540 aaKnown RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 GRHPRQ9UBQ7 328 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 TRAPPC4Q9Y296 219 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 COMMD3-BMI1R4GMX3 469 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 CCDC182A6NF36 153 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 EFCAB10A6NFE3 127 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 IFNGP01579 166 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 ITGB2P05107 769 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 ACVR2AP27037 513 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 PPIAP62937 165 aaKnown RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 ZP4Q12836 540 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 MELKQ14680 651 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 HYAL4Q2M3T9 481 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 KLHL12Q53G59 568 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 LEG1Q6P5S2 330 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 UBQLNLQ8IYU4 475 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 STX19Q8N4C7 294 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 TMEM178AQ8NBL3 297 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 MYDGFQ969H8 173 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 KLHL15Q96M94 604 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 CCNB1IP1Q9NPC3 277 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 BATF3Q9NR55 127 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 KLHL21Q9UJP4 597 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 B3GALT5Q9Y2C3 310 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SNX5Q9Y5X3 404 aa11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SPENQ96T58 3664 aaKnown RBP11.76□□□□□ -0.53
VPS26A-203ENST00000395098 SEC14L5O43304 696 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 PMS2P2O95744 297 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 PIPP12273 146 aaPredicted RBP11.75□□□□□ -0.53
VPS26A-203ENST00000395098 HTR1FP30939 366 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 MTNR1AP48039 350 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 RUNX1T1Q06455 604 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 KRR1Q13601 381 aaKnown RBP11.75□□□□□ -0.53
VPS26A-203ENST00000395098 FOXB2Q5VYV0 432 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 GTF2IRD2BQ6EKJ0 949 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 NHLRC1Q6VVB1 395 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 TRILQ7L0X0 811 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 MEPCEQ7L2J0 689 aaKnown RBP11.75□□□□□ -0.53
VPS26A-203ENST00000395098 GTF2IRD2Q86UP8 949 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 OR51L1Q8NGJ5 315 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 TXNDC15Q96J42 360 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 TSSK2Q96PF2 358 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 SRXN1Q9BYN0 137 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 H2AFY2Q9P0M6 372 aaPredicted RBP11.75□□□□□ -0.53
VPS26A-203ENST00000395098 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.75□□□□□ -0.53
VPS26A-203ENST00000395098 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 LIPGQ9Y5X9 500 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 ALPK2Q86TB3 2170 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 URB1O60287 2271 aaKnown RBP11.75□□□□□ -0.53
VPS26A-203ENST00000395098 IGHV3-15A0A0B4J1V0 119 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 H3F3AP84243 136 aa11.75□□□□□ -0.53
VPS26A-203ENST00000395098 DOC2BQ14184 412 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms