RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZAR1Q86SH2 424 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 TMEM52Q8NDY8 209 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 TSSK2Q96PF2 358 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 AICDAQ9GZX7 198 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.69□□□□□ -0.86
CALD1-203ENST00000393118 GPN1Q9HCN4 374 aaPredicted RBP9.69□□□□□ -0.86
CALD1-203ENST00000393118 CES1P1Q9UKY3 287 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 MMP17Q9ULZ9 603 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
CALD1-203ENST00000393118 ANKRD61A6NGH8 418 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 SELENOFO60613 162 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ATG12O94817 140 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ELK1P19419 428 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 DHPSP49366 369 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 GFERP55789 205 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TMEM65Q6PI78 240 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ESPNLQ6ZVH7 1005 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 NUP54Q7Z3B4 507 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 LNX2Q8N448 690 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 OR4M1Q8NGD0 313 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 MARC2Q969Z3 335 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 S100A16Q96FQ6 103 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 SENP5Q96HI0 755 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 STACQ99469 402 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 GAS2L1Q99501 681 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 ZNF350Q9GZX5 532 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TRPV4Q9HBA0 871 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 CMC2Q9NRP2 79 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 MN1Q10571 1320 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 EPOPA6NHQ4 379 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 SRPX2O60687 465 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 TRIM3O75382 744 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 CD2P06729 351 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 FBLP22087 321 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 NRG3P56975 720 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 SQSTM1Q13501 440 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 OPCMLQ14982 345 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 SMAD2Q15796 467 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 TCTE1Q5JU00 501 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TMEM69Q5SWH9 247 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 C12orf45Q8N5I9 185 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 CHST4Q8NCG5 386 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 FBXL2Q9UKC9 423 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 CTNSO60931 367 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TFP02787 698 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ACSM4P0C7M7 580 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ZNF14P17017 642 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 GIFP27352 417 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 CCKBRP32239 447 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ASAH1Q13510 395 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 SF3A2Q15428 464 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 KIRREL2Q6UWL6 708 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ZNF627Q7L945 461 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TCTE3Q8IZS6 198 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 JAGN1Q8N5M9 183 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 C16orf52Q8NHV5 167 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 NT5CQ8TCD5 201 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 LINC00052Q96N35 136 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 HCAR1Q9BXC0 346 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 RP1L1Q8IWN7 2480 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 ZNF705EA8MWA4 302 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 FMO6PO60774 539 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 FZD7O75084 574 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 HLA-DMAP28067 261 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 FRKP42685 505 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 SRP9P49458 86 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 AP3S2P59780 193 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 RAB5BP61020 215 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 SERTAD2Q14140 314 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 HBMQ6B0K9 141 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TMEM17Q86X19 198 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 LRRC28Q86X40 367 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 ZNF595Q8IYB9 648 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 OR8S1Q8NH09 359 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 OR4C3Q8NH37 302 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 TTC9Q92623 222 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 DAZLQ92904 295 aaKnown RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 CPNE2Q96FN4 548 aaPredicted RBP9.68□□□□□ -0.86
CALD1-203ENST00000393118 SEC61A2Q9H9S3 476 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 UBQLN4Q9NRR5 601 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 ASB6Q9NWX5 421 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 KLRF1Q9NZS2 232 aa9.68□□□□□ -0.86
CALD1-203ENST00000393118 BRINP1O60477 761 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 SYPP08247 313 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 HTR2AP28223 471 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 SIRPAP78324 504 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 ZSCAN1Q8NBB4 408 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 LRRC46Q96FV0 321 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 OR10A4Q9H209 315 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 ZNF576Q9H609 170 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 ELL3Q9HB65 397 aaPredicted RBP9.67□□□□□ -0.86
CALD1-203ENST00000393118 MYEF2Q9P2K5 600 aaKnown RBP9.67□□□□□ -0.86
CALD1-203ENST00000393118 ACAD8Q9UKU7 415 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 HS3ST3A1Q9Y663 406 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 HRKO00198 91 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 RECKO95980 971 aa9.67□□□□□ -0.86
CALD1-203ENST00000393118 OPN1LWP04000 364 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms