RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PLAC8L1A1L4L8 177 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RBMY1BA6NDE4 496 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RBMY1EA6NEQ0 496 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 C12orf77C9JDV5 145 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 F5H6K3 240 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CCER2I3L3R5 266 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 SGK1O00141 431 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 POLR2DO15514 142 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 B3GAT3O94766 335 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 GABARAPO95166 117 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CA1P00915 261 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IGLV2-23P01705 113 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RBMY1DP0C7P1 496 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 TLX1NBP0CAT3 122 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4L2P0CJ85 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4L3P0CJ86 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4L5P0CJ88 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4L6P0CJ89 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4L7P0CJ90 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 HSMCR30P0CW71 290 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RBMY1A1P0DJD3 496 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IGHV1-8P0DP01 117 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF30P17039 623 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IL1RNP18510 177 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 POLR2EP19388 210 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IMPDH1P20839 514 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 SLC2A5P22732 501 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CASP14P31944 242 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RORAP35398 523 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 TGFBR1P36897 503 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 HPCAL1P37235 193 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CRYBB1P53674 252 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 PLA2G16P53816 162 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 PRRX1P54821 245 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ESRRGP62508 458 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 EWSR1Q01844 656 aaKnown RBP eCLIP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 KLRC3Q07444 240 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF816Q0VGE8 651 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IFT88Q13099 833 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 SRSF5Q13243 272 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IGFBP7Q16270 282 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 GUCA2BQ16661 112 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RSPO1Q2MKA7 263 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RABL6Q3YEC7 729 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 BCL7AQ4VC05 210 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 BEND3Q5T5X7 828 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 OR52E8Q6IFG1 317 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4L9Q6RFH8 374 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RBM43Q6ZSC3 357 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 LHFPL4Q7Z7J7 247 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF546Q86UE3 836 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF573Q86YE8 665 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CALHM1Q8IU99 346 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 SLC35F2Q8IXU6 374 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 LGI3Q8N145 548 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 MINDY2Q8NBR6 621 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 VN1R2Q8NFZ6 395 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 OR4D9Q8NGE8 314 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 OR52E1Q8NGJ3 308 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RNF139Q8WU17 664 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 EFHD2Q96C19 240 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CMTM7Q96FZ5 175 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 NARS2Q96I59 477 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DNAJC1Q96KC8 554 aaKnown RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 OSBPL10Q9BXB5 764 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 THAP9Q9H5L6 903 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 REEP4Q9H6H4 257 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 NHEJ1Q9H9Q4 299 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 SLCO1B3Q9NPD5 702 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ISYNA1Q9NPH2 558 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 FAM49BQ9NUQ9 324 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ATXN10Q9UBB4 475 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CLCF1Q9UBD9 225 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CTSFQ9UBX1 484 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 DUX4Q9UBX2 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 MOSPD1Q9UJG1 213 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF391Q9UJN7 358 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF229Q9UJW7 825 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 S4R3C0 116 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 ITGB4P16144 1822 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 BRWD3Q6RI45 1802 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 MN1Q10571 1320 aaPredicted RBP0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 PHF3Q92576 2039 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TRAV6A0A075B6T7 132 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 IGKV1D-8A0A087WSZ0 117 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 IGHV3-74A0A0B4J1X5 117 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 A0A0B4J2A0 478 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 A8MXQ7 604 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 C16orf90A8MZG2 172 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 J3QRE1 110 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 XPO1O14980 1071 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 PFKFB2O60825 505 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 OR4F21O95013 312 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 MFN2O95140 757 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 AP2A1O95782 977 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 BAG2O95816 211 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 GAPDHP04406 335 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 HLA-DPB1P04440 258 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 IGHV3-43DP0DP04 118 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 CALM1P0DP23 149 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms