RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ZNF511Q8NB15 262 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 BEST4Q8NFU0 473 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 HMGB4Q8WW32 186 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 ADAD1Q96M93 576 aaKnown RBP16.58■□□□□ 0.24
TDP2-202ENST00000378198 SPRTNQ9H040 489 aaPredicted RBP16.58■□□□□ 0.24
TDP2-202ENST00000378198 C8orf33Q9H7E9 229 aaPredicted RBP16.58■□□□□ 0.24
TDP2-202ENST00000378198 DLL4Q9NR61 685 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 UBQLN4Q9NRR5 601 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 MMP17Q9ULZ9 603 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 NPTNQ9Y639 398 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 F5P12259 2224 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 CACNA1IQ9P0X4 2223 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 FAM171A2A8MVW0 826 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 TGM6O95932 706 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 HPGDP15428 266 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 PSMB1P20618 241 aaKnown RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 DNASE1P24855 282 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 BLKP51451 505 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 CTXN1P60606 82 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 SERTAD2Q14140 314 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 Q499Y3 187 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 ESCO2Q56NI9 601 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 ALG10Q5BKT4 473 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 SFRP4Q6FHJ7 346 aaPredicted RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 STAC2Q6ZMT1 411 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 LSM14AQ8ND56 463 aaKnown RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 OR52I2Q8NH67 350 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 OR5AK2Q8NH90 309 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 MMABQ96EY8 250 aaPredicted RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 TCF7L1Q9HCS4 588 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 EXOSC3Q9NQT5 275 aaKnown RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 TMEM72A0PK05 275 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 OR2W5A6NFC9 320 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 B4DGG1 531 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 GMDSO60547 372 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 SLC22A5O76082 557 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 TXNDC12O95881 172 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 CLPSP04118 112 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 SYPP08247 313 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 POU3F3P20264 500 aaPredicted RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 BIKQ13323 160 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 IKZF1Q13422 519 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 PWWP2BQ6NUJ5 590 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 MED25Q71SY5 747 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 GATSQ8NAP1 163 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 OR11G2Q8NGC1 345 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 SYNPRQ8TBG9 265 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 C15orf40Q8WUR7 153 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 MS4A3Q96HJ5 214 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 MAP6Q96JE9 813 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 SORCS2Q96PQ0 1159 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 MMP25Q9NPA2 562 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 GPR27Q9NS67 375 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 MRPL15Q9P015 296 aaKnown RBP16.57■□□□□ 0.24
TDP2-202ENST00000378198 OR5V1Q9UGF6 321 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 FOXJ3Q9UPW0 622 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 THADAQ6YHU6 1953 aa16.57■□□□□ 0.24
TDP2-202ENST00000378198 UPK3AO75631 287 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 RPP14O95059 124 aaKnown RBP16.56■□□□□ 0.24
TDP2-202ENST00000378198 ASAH2BP0C7U1 165 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 OR8G3PP0DMU2 310 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 UBL4AP11441 157 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 MAGEB1P43366 347 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 SKP2Q13309 424 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 EMC4Q5J8M3 183 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 ZNF680Q8NEM1 530 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 PHOSPHO1Q8TCT1 267 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 NXPE2Q96DL1 559 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 RADILQ96JH8 1075 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 MOGAT1Q96PD6 335 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 MAP3K3Q99759 626 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 TSPAN10Q9H1Z9 355 aaPredicted RBP16.56■□□□□ 0.24
TDP2-202ENST00000378198 NKIRAS2Q9NYR9 191 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 MRM2Q9UI43 246 aaKnown RBP16.56■□□□□ 0.24
TDP2-202ENST00000378198 ETV7Q9Y603 341 aa16.56■□□□□ 0.24
TDP2-202ENST00000378198 KHDRBS3O75525 346 aaKnown RBP16.55■□□□□ 0.24
TDP2-202ENST00000378198 HPXP02790 462 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 MNDAP41218 407 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 PTH2RP49190 550 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 ART1P52961 327 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
TDP2-202ENST00000378198 METTL11BQ5VVY1 283 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 LIPNQ5VXI9 398 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 CDC20BQ86Y33 519 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 OR6V1Q8N148 313 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 ZSCAN1Q8NBB4 408 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 C1orf216Q8TAB5 229 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 NSMAFQ92636 917 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 HAVCR1Q96D42 359 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 TSSK2Q96PF2 358 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 ZNF436Q9C0F3 470 aaPredicted RBP16.55■□□□□ 0.24
TDP2-202ENST00000378198 HEXA-AS1Q9H8Q6 139 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 WSB2Q9NYS7 404 aaPredicted RBP16.55■□□□□ 0.24
TDP2-202ENST00000378198 GRHPRQ9UBQ7 328 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 TRBV5-5A0A0J9YX44 114 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 A0A1W2PQ72 361 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 ANKRD20A5PA0PJZ0 165 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 LINC00862A6NCI5 91 aa16.55■□□□□ 0.24
TDP2-202ENST00000378198 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms