RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RPS25P62851 125 aaKnown RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 KCNJ10P78508 379 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 OR14A16Q8NHC5 309 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 NUDT9Q9BW91 350 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 RIMS4Q9H426 269 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 IER3IP1Q9Y5U9 82 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 ATAD5Q96QE3 1844 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 KITLGP21583 273 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 ACHEP22303 614 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 PRDX1Q06830 199 aaKnown RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 CAMK2BQ13554 666 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 MFSD9Q8NBP5 474 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 RNF39Q9H2S5 420 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 LYRM4Q9HD34 91 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 AGRPO00253 132 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 CTDSPLO15194 276 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 RPA2P15927 270 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 TNK1Q13470 666 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 PDLIM3Q53GG5 364 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 C1orf94Q6P1W5 598 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 GPR137CQ8N3F9 429 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 MBOAT4Q96T53 435 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF251Q9BRH9 671 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 GPR174Q9BXC1 333 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 TUBG2Q9NRH3 451 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 CMC2Q9NRP2 79 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 GFRA2O00451 464 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF16P17020 682 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RPS26P62854 115 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TNFRSF17Q02223 184 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 PIP5KL1Q5T9C9 394 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TRAPPC6BQ86SZ2 158 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TSTD1Q8NFU3 115 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 HOXB2P14652 356 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 C21orf58P58505 322 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TGFBR3Q03167 851 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 AANATQ16613 207 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 SMN1Q16637 294 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 AARDQ4LEZ3 155 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR52H1Q8NGJ2 320 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZMYND19Q96E35 227 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 DTD2Q96FN9 168 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 DEFB126Q9BYW3 111 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 GKN1Q9NS71 199 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ITGB4P16144 1822 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 HIDE1A8MVS5 230 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 MPIG6BO95866 241 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 PRDX3P30048 256 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF92Q03936 586 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 NKPD1Q17RQ9 610 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TEX19Q8NA77 164 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR1S2Q8NGQ3 325 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 KLHDC7BQ96G42 594 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF764Q96H86 408 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 FAM96BQ9Y3D0 163 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 EIF1BO60739 113 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 FGF7P21781 194 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RAB13P51153 203 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 FOXK2Q01167 660 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR4F15Q8NGB8 312 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF480Q8WV37 535 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TSLPQ969D9 159 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 MMP26Q9NRE1 261 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR5K3A6NET4 321 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 C11orf98E9PRG8 122 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF264O43296 627 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 HLA-DOBP13765 273 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 UBXN2BQ14CS0 331 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 NAA40Q86UY6 237 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR7D2Q96RA2 312 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 HPNP05981 417 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 KCNJ3P48549 501 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 MLLT10P55197 1068 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ALKAL1Q6UXT8 129 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR51Q1Q8NH59 317 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 LHFPL5Q8TAF8 219 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 SEH1LQ96EE3 360 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 SYNPO2LQ9H987 977 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RFPL4AA6NLU0 287 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RFPL4AL1F8VTS6 287 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF8P17098 575 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RAB6AP20340 208 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 GPR85P60893 370 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RPS26P11Q5JNZ5 115 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 SHROOM3Q8TF72 1996 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 OR5H14A6NHG9 310 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 IFITM5A6NNB3 132 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 C4orf47A7E2U8 309 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 XRCC3O43542 346 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 SLC11A1P49279 550 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 LY6G5CQ5SRR4 150 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 GOT1L1Q8NHS2 421 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms