RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 C1QTNF12Q5T7M4 302 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 ABHD12BQ7Z5M8 362 aaPredicted RBP16.59■□□□□ 0.25
CKS1B-203ENST00000368439 WDFY1Q8IWB7 410 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 TMEM123Q8N131 208 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 OR1K1Q8NGR3 316 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 PROX1Q92786 737 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 MPP4Q96JB8 637 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 OR2M2Q96R28 347 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 NELFAQ9H3P2 528 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 BAG5Q9UL15 447 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 AMDHD2Q9Y303 409 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 ELOVL7A1L3X0 281 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 ZNF587BE7ETH6 402 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 OVOL3O00110 214 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 PLPP3O14495 311 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 SNX3O60493 162 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 MT-ATP6P00846 226 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 PTAFRP25105 342 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 SPOCK1Q08629 439 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.24
CKS1B-203ENST00000368439 ZNF74Q16587 644 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 CYBRD1Q53TN4 286 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 Q5PR19 223 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 PRSS57Q6UWY2 283 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 TMEM108Q6UXF1 575 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 HACD2Q6Y1H2 254 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 ARPINQ7Z6K5 226 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 SMAP2Q8WU79 429 aaPredicted RBP16.58■□□□□ 0.24
CKS1B-203ENST00000368439 TMEM171Q8WVE6 324 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 BCL2L2Q92843 193 aaPredicted RBP16.58■□□□□ 0.24
CKS1B-203ENST00000368439 PERPQ96FX8 193 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 C1QTNF6Q9BXI9 259 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 ASPNQ9BXN1 380 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 LAMP3Q9UQV4 416 aa16.58■□□□□ 0.24
CKS1B-203ENST00000368439 NME4O00746 187 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 SLC43A1O75387 559 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 KRT33AO76009 404 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 NQO1P15559 274 aaKnown RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 CDH2P19022 906 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 LSP1P33241 339 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 GYS2P54840 703 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 PRPS1P60891 318 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 ROR2Q01974 943 aaKnown RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 PUDPQ08623 228 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 PMS2P3Q13401 168 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 TBRG1Q3YBR2 411 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 PHYHD1Q5SRE7 291 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 TTC33Q6PID6 262 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 KLHL17Q6TDP4 642 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 NKAIN4Q8IVV8 208 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 UEVLDQ8IX04 471 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 ANKK1Q8NFD2 765 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 OR5J2Q8NH18 312 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 ZNF837Q96EG3 531 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 TXNDC15Q96J42 360 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 RADILQ96JH8 1075 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 HOPXQ9BPY8 73 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 SLC19A3Q9BZV2 496 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 EFCAB1Q9HAE3 211 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 MEPEQ9NQ76 525 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 CISD1Q9NZ45 108 aaKnown RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 AP3M1Q9Y2T2 418 aa16.57■□□□□ 0.24
CKS1B-203ENST00000368439 MAGED1Q9Y5V3 778 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-203ENST00000368439 ZFHX3Q15911 3703 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 M0R1B8 84 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 ARHGEF9O43307 516 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 SHOX2O60902 331 aaPredicted RBP16.56■□□□□ 0.24
CKS1B-203ENST00000368439 IFNA14P01570 189 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 CD8AP01732 235 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 FOSL1P15407 271 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 OR1E2P47887 323 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 SLC7A2P52569 658 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 SELENOWP63302 87 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 POU3F1Q03052 451 aaPredicted RBP16.56■□□□□ 0.24
CKS1B-203ENST00000368439 LIPEQ05469 1076 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 LRRC23Q53EV4 343 aaPredicted RBP16.56■□□□□ 0.24
CKS1B-203ENST00000368439 B3GLCTQ6Y288 498 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 PXKQ7Z7A4 578 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 C10orf53Q8N6V4 93 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 LRRC17Q8N6Y2 441 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 MAGEE2Q8TD90 523 aaPredicted RBP16.56■□□□□ 0.24
CKS1B-203ENST00000368439 POLR2J2Q9GZM3 115 aaKnown RBP16.56■□□□□ 0.24
CKS1B-203ENST00000368439 POLR2J3Q9H1A7 115 aaKnown RBP16.56■□□□□ 0.24
CKS1B-203ENST00000368439 FKRPQ9H9S5 495 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 GPR35Q9HC97 309 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 OBP2BQ9NPH6 170 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 MED29Q9NX70 200 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 TAS2R5Q9NYW4 299 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 MGAT4BQ9UQ53 548 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 NOX1Q9Y5S8 564 aa16.56■□□□□ 0.24
CKS1B-203ENST00000368439 ARPC4-TTLL3A0A0A6YYG9 625 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 GMNCA6NCL1 334 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 E7EQL1 145 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 OR5F1O95221 314 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 CH25HO95992 272 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 ASAH2BP0C7U1 165 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 CDH11P55287 796 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 RPS4XP62701 263 aaKnown RBP16.55■□□□□ 0.24
CKS1B-203ENST00000368439 IL1RL1Q01638 556 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 ZP4Q12836 540 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms