RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 APOBEC3BQ9UH17 382 aaKnown RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 LRRC37AA6NMS7 1700 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 PRSS38A1L453 326 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 APBB3O95704 486 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 CBFBQ13951 182 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 STEAP1BQ6NZ63 245 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 RNF165Q6ZSG1 346 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 KDM8Q8N371 416 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 THRSPQ92748 146 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF416Q9BWM5 594 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 FGF22Q9HCT0 170 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 PARPBPQ9NWS1 579 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 CGGBP1Q9UFW8 167 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 EP400Q96L91 3159 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-201ENST00000361866 RBMXL2O75526 392 aaKnown RBP12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF765Q7L2R6 523 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 NLRC3Q7RTR2 1065 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 PATE1Q8WXA2 126 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 RNF32Q9H0A6 362 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 VDAC3Q9Y277 283 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 MYOFQ9NZM1 2061 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 PRAMEF25A6NGN4 478 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 C17orf105B2RV13 164 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 H0Y8X5 98 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SNAPC5O75971 98 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 PAPLNO95428 1278 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 NTSR1P30989 418 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 HOXC8P31273 242 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SLC9A3R2Q15599 337 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 NSDHLQ15738 373 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SGCAQ16586 387 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 GLYR1Q49A26 553 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-201ENST00000361866 COX15Q7KZN9 410 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 MAMDC2Q7Z304 686 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-201ENST00000361866 C12orf40Q86WS4 652 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 OR4D9Q8NGE8 314 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 FAM83CQ9BQN1 747 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 ANKRD19PQ9H560 264 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 ISYNA1Q9NPH2 558 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 CYP8B1Q9UNU6 501 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 A6NJ64 397 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 GABARAPH6UMI1 98 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 TPOP07202 933 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 HOXB5P09067 269 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 MEP1BQ16820 701 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 FAM78AQ5JUQ0 283 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM88Q6PEY1 159 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 FBLIM1Q8WUP2 373 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 H3BUI4 141 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SYT7O43581 403 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SSX5O60225 188 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 FGF17O60258 216 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 TIMP1P01033 207 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 GJA4P35212 333 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 CHRFAM7AQ494W8 412 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 OR10K2Q6IF99 312 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 MFSD8Q8NHS3 518 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 RGCCQ9H4X1 137 aa12.8□□□□□ -0.36
COL6A1-201ENST00000361866 SIRT3Q9NTG7 399 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-201ENST00000361866 IDSB3KWA1 339 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 SRPX2O60687 465 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-201ENST00000361866 ERCC1P07992 297 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TAS2R19P59542 299 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 KIR2DS3Q14952 304 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM201Q5SNT2 666 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 GLYATL3Q5SZD4 288 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 THSD4Q6ZMP0 1018 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 OR6M1Q8NGM8 313 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 OR5M1Q8NGP8 315 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 MAFIPQ8WZ33 124 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 NECAB3Q96P71 396 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-201ENST00000361866 SCGB3A2Q96PL1 93 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 VRK1Q99986 396 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-201ENST00000361866 SDHAF3Q9NRP4 125 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 IFITM5A6NNB3 132 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 UBBP0CG47 229 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 UBCP0CG48 685 aaKnown RBP12.79□□□□□ -0.36
COL6A1-201ENST00000361866 RGS19P49795 217 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 CDK5R1Q15078 307 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 OR10R2Q8NGX6 335 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 CCL4L1Q8NHW4 92 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TOMM40LQ969M1 308 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 LRRC46Q96FV0 321 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 UQCC2Q9BRT2 126 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TBC1D29Q9UFV1 150 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 UBL4AP11441 157 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms