RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LIPT2A6NK58 231 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 SNX4O95219 450 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 ACTA2P62736 377 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 ACTG2P63267 376 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 JAZF1Q86VZ6 243 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 PLCZ1Q86YW0 608 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 CHCHD6Q9BRQ6 235 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 CDADC1Q9BWV3 514 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 OR51V1Q9H2C8 321 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 KLHL13Q9P2N7 655 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 GRHPRQ9UBQ7 328 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 FKBP7Q9Y680 259 aa15.53■□□□□ 0.08
VPS13B-201ENST00000355155 DAPL1A0PJW8 107 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 HSPB2A8KAH6 182 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 OGG1O15527 345 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 TRIM3O75382 744 aaPredicted RBP15.52■□□□□ 0.08
VPS13B-201ENST00000355155 APOL3O95236 402 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 MT-ND5P03915 603 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 HSPB2Q16082 182 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 KLHL12Q53G59 568 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 LIPKQ5VXJ0 399 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 BICRALQ6AI39 1079 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 LEG1Q6P5S2 330 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 LSRQ86X29 649 aaPredicted RBP15.52■□□□□ 0.08
VPS13B-201ENST00000355155 GTPBP8Q8N3Z3 284 aaPredicted RBP15.52■□□□□ 0.08
VPS13B-201ENST00000355155 C10orf53Q8N6V4 93 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 ZPLD1Q8TCW7 415 aa15.52■□□□□ 0.08
VPS13B-201ENST00000355155 TRMT61AQ96FX7 289 aaKnown RBP15.52■□□□□ 0.08
VPS13B-201ENST00000355155 MRPL48Q96GC5 212 aaKnown RBP15.52■□□□□ 0.08
VPS13B-201ENST00000355155 TXNL4BQ9NX01 149 aaKnown RBP15.52■□□□□ 0.08
VPS13B-201ENST00000355155 IMPDH2P12268 514 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 LSM3P62310 102 aaKnown RBP15.52■□□□□ 0.07
VPS13B-201ENST00000355155 SELENBP1Q13228 472 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 ZNF404Q494X3 552 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 TUBA3EQ6PEY2 450 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 SLC16A9Q7RTY1 509 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 ZNRF4Q8WWF5 429 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 NPAS1Q99742 590 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 WDR12Q9GZL7 423 aaKnown RBP15.52■□□□□ 0.07
VPS13B-201ENST00000355155 IRF2BPLQ9H1B7 796 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 KLHL1Q9NR64 748 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 B3GALT5Q9Y2C3 310 aa15.52■□□□□ 0.07
VPS13B-201ENST00000355155 ARPC4-TTLL3A0A0A6YYG9 625 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 MS4A18H0YCH9 400 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 SLC30A4O14863 429 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 SEC14L5O43304 696 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 TGFBR1P36897 503 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 BMXP51813 675 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 BLVRAP53004 296 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 MRPL28Q13084 256 aaKnown RBP15.51■□□□□ 0.07
VPS13B-201ENST00000355155 MS4A18Q3C1V0 323 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 GXYLT1Q4G148 440 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 C3orf33Q6P1S2 294 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 VASH1Q7L8A9 365 aaPredicted RBP15.51■□□□□ 0.07
VPS13B-201ENST00000355155 RAB43Q86YS6 212 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 SLC35F2Q8IXU6 374 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 TIGD4Q8IY51 512 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 MFSD4AQ8N468 514 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 OR2T4Q8NH00 348 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 PTGES2Q9H7Z7 377 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 TRIM36Q9NQ86 728 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 HDGFL3Q9Y3E1 203 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 FAM47E-STBD1D6RA91 191 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 RAD1O60671 282 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 SC5DO75845 299 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 RENP00797 406 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 LIFP15018 202 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 ATP6V1E1P36543 226 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 ENTPD1P49961 510 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 P2RY4P51582 365 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 CCDC58Q4VC31 144 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 STPG1Q5TH74 334 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 SLC22A10Q63ZE4 541 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 H1FNTQ75WM6 255 aaPredicted RBP15.51■□□□□ 0.07
VPS13B-201ENST00000355155 PSMF1Q92530 271 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 CHST11Q9NPF2 352 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 TRAPPC4Q9Y296 219 aa15.51■□□□□ 0.07
VPS13B-201ENST00000355155 A0A1W2PQL4 384 aaPredicted RBP15.5■□□□□ 0.07
VPS13B-201ENST00000355155 A6NIZ1 184 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 DSCR4P56555 118 aaPredicted RBP15.5■□□□□ 0.07
VPS13B-201ENST00000355155 RAP1BP61224 184 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 RAP1AP62834 184 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 RPS25P62851 125 aaKnown RBP15.5■□□□□ 0.07
VPS13B-201ENST00000355155 ZNF846Q147U1 533 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 DMKNQ6E0U4 476 aaPredicted RBP15.5■□□□□ 0.07
VPS13B-201ENST00000355155 DHRS13Q6UX07 377 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 TEX19Q8NA77 164 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 ALG12Q9BV10 488 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 ISG20L2Q9H9L3 353 aaKnown RBP15.5■□□□□ 0.07
VPS13B-201ENST00000355155 P4HTMQ9NXG6 502 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 ST6GALNAC2Q9UJ37 374 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
VPS13B-201ENST00000355155 TGM4P49221 684 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 KCTD20Q7Z5Y7 419 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 TMPRSS12Q86WS5 348 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 CDC20BQ86Y33 519 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 ATP6V1C2Q8NEY4 427 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 MFRPQ9BY79 579 aa15.5■□□□□ 0.07
VPS13B-201ENST00000355155 TSPAN10Q9H1Z9 355 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms