RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 A0A1W2PRG6 482 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 FAM171A2A8MVW0 826 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC19A2O60779 497 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 WISP1O95388 367 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 CSF3P09919 207 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 GDI2P50395 445 aaKnown RBP18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 KCTD12Q96CX2 325 aaKnown RBP18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 ITPKCQ96DU7 683 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 ZC3H10Q96K80 434 aaKnown RBP18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 WDR77Q9BQA1 342 aaPredicted RBP18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 PPP1R3EQ9H7J1 279 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 ACOXLQ9NUZ1 547 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 TAS2R5Q9NYW4 299 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 TECTAO75443 2155 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 A0A0C4DFX4 3053 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 TMEM72A0PK05 275 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 GDF9O60383 454 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 CER1O95813 267 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 IDNKQ5T6J7 187 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 FAM69AQ5T7M9 428 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC16A9Q7RTY1 509 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 ZNF511Q8NB15 262 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 OR2T4Q8NH00 348 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 DNAJA3Q96EY1 480 aa18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 ZNF346Q9UL40 294 aaKnown RBP18.45■□□□□ 0.54
CHRNA3-202ENST00000348639 A8MVM7 634 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SNPHO15079 494 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SSX4O60224 188 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 ZNF354AO60765 605 aaPredicted RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 FBXW4P57775 412 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SGCBQ16585 318 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 COL28A1Q2UY09 1125 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 NRARPQ7Z6K4 114 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 BPHLQ86WA6 291 aaPredicted RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 OR8K3Q8NH51 312 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 CEP76Q8TAP6 659 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 ATOH1Q92858 354 aaPredicted RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SPSB2Q99619 263 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 TTYH2Q9BSA4 534 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC26A1Q9H2B4 701 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 CCDC86Q9H6F5 360 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SRA1Q9HD15 236 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 WDR70Q9NW82 654 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 TRAV1-2A0A0B4J238 106 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 TRBV2A0A0J9YWF9 115 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 TRBV11-1A0A0K0K1C0 115 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 RENP00797 406 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 EDNRAP25101 427 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 HTR3AP46098 478 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 ASAH1Q13510 395 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 RIN1Q13671 783 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 CLPPQ16740 277 aaPredicted RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 ZNF684Q5T5D7 378 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 LCN10Q6JVE6 187 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 CPEB2Q7Z5Q1 589 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 OR13C5Q8NGS8 318 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 STK35Q8TDR2 534 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 SMOC1Q9H4F8 434 aa18.44■□□□□ 0.54
CHRNA3-202ENST00000348639 TMEM200CA6NKL6 621 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 DCTN6O00399 190 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 NAGAP17050 411 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 APEX1P27695 318 aaKnown RBP18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 RFX2P48378 723 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 CD300CQ08708 224 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 C17orf67Q0P5P2 114 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 C1orf140Q5VVS0 124 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 SFXN4Q6P4A7 337 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 C5orf46Q6UWT4 87 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 TIGD4Q8IY51 512 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 OR5L2Q8NGL0 311 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 TMEM234Q8WY98 164 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 HGDQ93099 445 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC25A36Q96CQ1 311 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 TXNDC15Q96J42 360 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 CRB3Q9BUF7 120 aa18.43■□□□□ 0.54
CHRNA3-202ENST00000348639 A0A0G2JK05 382 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 H7C1C5 153 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 GATBO75879 557 aaKnown RBP18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 FGF5P12034 268 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 THBS2P35442 1172 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 HOXD12P35452 270 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 RPS11P62280 158 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 LCN6P62502 163 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 TMEM205Q6UW68 189 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 KCTD20Q7Z5Y7 419 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 EGFL6Q8IUX8 553 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 OR6V1Q8N148 313 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 RPS4Y2Q8TD47 263 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 C8orf44Q96CB5 159 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 UBL7Q96S82 380 aaPredicted RBP18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 INIPQ9NRY2 104 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 ANKUB1A6NFN9 424 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 MEN1O00255 615 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 GPRIN2O60269 458 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 ARL6IP5O75915 188 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 CYC1P08574 325 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 GRPRP30550 384 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 PSMB10P40306 273 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 OR10A3P58181 314 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 IL11RAQ14626 422 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms