RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CCL4P13236 92 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 SSTR2P30874 369 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 GABRA5P31644 462 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 C21orf58P58505 322 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 SERTAD2Q14140 314 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 SF3B4Q15427 424 aaKnown RBP eCLIP12.15□□□□□ -0.46
CASC4-202ENST00000345795 COL28A1Q2UY09 1125 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 NDUFAF7Q7L592 441 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 MEIOBQ8N635 442 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 ASB15Q8WXK1 588 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 PLEKHA1Q9HB21 404 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 C14orf105Q9NVL8 296 aa12.15□□□□□ -0.46
CASC4-202ENST00000345795 CGGBP1Q9UFW8 167 aaPredicted RBP12.15□□□□□ -0.46
CASC4-202ENST00000345795 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.47
CASC4-202ENST00000345795 UCHL1P09936 223 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 GABRB1P18505 474 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 SGCBQ16585 318 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 C3orf38Q5JPI3 329 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 TMEM69Q5SWH9 247 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 PWWP2BQ6NUJ5 590 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 FOXRED2Q8IWF2 684 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 ARHGDIGQ99819 225 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 KLHL9Q9P2J3 617 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 PCDHGA3Q9Y5H0 932 aa12.15□□□□□ -0.47
CASC4-202ENST00000345795 CXorf51AA0A1B0GTR3 108 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 DCTN6O00399 190 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 TIAF1O95411 115 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 PGCP20142 388 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 EEF1A1P68104 462 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 NDUFB11Q9NX14 153 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 SPI1P17947 270 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 CDKN2AP42771 156 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 PSPHP78330 225 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 EIF2B1Q14232 305 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 PRTGQ2VWP7 1150 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 HLA-BQ31612 363 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 SFXN4Q6P4A7 337 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 ATCAYQ86WG3 371 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 OR10AC1Q8NH08 325 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 OR5AK2Q8NH90 309 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 DNAJA4Q8WW22 397 aaPredicted RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 MRPL48Q96GC5 212 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 ARL5BQ96KC2 179 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 THAP7Q9BT49 309 aaPredicted RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 CACNG6Q9BXT2 260 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 ZNF69Q9UC07 566 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 ARL6IP5O75915 188 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 MAGEA8P43361 318 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 SIRPAP78324 504 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 OCLNQ16625 522 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 WBP2NLQ6ICG8 309 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 ZNF544Q6NX49 715 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 FAM180AQ6UWF9 173 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 NT5CQ8TCD5 201 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 ATG5Q9H1Y0 275 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 AUNIPQ9H7T9 357 aa12.14□□□□□ -0.47
CASC4-202ENST00000345795 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
CASC4-202ENST00000345795 SHISA3A0PJX4 238 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 ZNF726A6NNF4 738 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 AK1P00568 194 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 EIF4EP06730 217 aaKnown RBP12.13□□□□□ -0.47
CASC4-202ENST00000345795 IFNGR1P15260 489 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 IL11P20809 199 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 ABCD3P28288 659 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 IRF3Q14653 427 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 ZNRF4Q8WWF5 429 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 PMM1Q92871 262 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 SLC25A46Q96AG3 418 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 C3orf49Q96BT1 292 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 PPIL3Q9H2H8 161 aaKnown RBP12.13□□□□□ -0.47
CASC4-202ENST00000345795 CMC2Q9NRP2 79 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 RCE1Q9Y256 329 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 ZNF337Q9Y3M9 751 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 TMED7-TICAM2A0A0A6YYA0 188 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 C9J4A7 227 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 HSD11B1P28845 292 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 CDAP32320 146 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 TSFMP43897 325 aaKnown RBP12.13□□□□□ -0.47
CASC4-202ENST00000345795 ZNF117Q03924 483 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 KLHL24Q6TFL4 600 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 OR51D1Q8NGF3 324 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 GRPEL2Q8TAA5 225 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 TAAR8Q969N4 342 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 ARHGAP9Q9BRR9 750 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 PRRG4Q9BZD6 226 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 FLVCR2Q9UPI3 526 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 TMED7Q9Y3B3 224 aa12.13□□□□□ -0.47
CASC4-202ENST00000345795 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms