RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CD40P25942 277 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 RIPPLY3P57055 190 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 UBE2NP61088 152 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 TTC33Q6PID6 262 aaPredicted RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 KRTAP1-3Q8IUG1 177 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 RBM45Q8IUH3 476 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 GPR137CQ8N3F9 429 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 POU5F2Q8N7G0 328 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 WDR31Q8NA23 367 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 PIK3C3Q8NEB9 887 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 IGFBPL1Q8WX77 278 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SLC41A3Q96GZ6 507 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 ZNF583Q96ND8 569 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 PCDHAC1Q9H158 963 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 ZNF701Q9NV72 531 aaPredicted RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 MED13LQ71F56 2210 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SHISA9B4DS77 424 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 UPK3AO75631 287 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 COX4I1P13073 169 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SEC24CP53992 1094 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 ATP5J2P56134 94 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 ROR2Q01974 943 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 LGALS3BPQ08380 585 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 PUDPQ08623 228 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 HIKESHIQ53FT3 197 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SPATA21Q7Z572 469 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 CARM1Q86X55 608 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 ANKK1Q8NFD2 765 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 OR4D11Q8NGI4 311 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 OR1K1Q8NGR3 316 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 TRMT61AQ96FX7 289 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 BOD1Q96IK1 185 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 MOGAT1Q96PD6 335 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 C1QTNF6Q9BXI9 259 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SLC19A3Q9BZV2 496 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 POLR2J2Q9GZM3 115 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 NSRP1Q9H0G5 558 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 POLR2J3Q9H1A7 115 aaKnown RBP14.09□□□□□ -0.15
ATG4B-201ENST00000344376 DLL4Q9NR61 685 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SLC7A7Q9UM01 511 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 SH3GLB1Q9Y371 365 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 NOX1Q9Y5S8 564 aa14.09□□□□□ -0.15
ATG4B-201ENST00000344376 TRAF3IP2O43734 574 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-201ENST00000344376 ZNF432O94892 652 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 OR6A2O95222 327 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 DANCRP0C864 163 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 CRYBA2P53672 197 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 POU3F1Q03052 451 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-201ENST00000344376 TBRG1Q3YBR2 411 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 LRRC23Q53EV4 343 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-201ENST00000344376 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 MICU2Q8IYU8 434 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 OR5J2Q8NH18 312 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 C18orf12Q96KH6 178 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 Q96MF0 132 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 FKRPQ9H9S5 495 aa14.08□□□□□ -0.16
ATG4B-201ENST00000344376 MOV10Q9HCE1 1003 aaKnown RBP14.08□□□□□ -0.16
ATG4B-201ENST00000344376 DSCAMO60469 2012 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 ELOVL7A1L3X0 281 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 MS4A18H0YCH9 400 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 EBAG9O00559 213 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 SOD3P08294 240 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 AHCYP23526 432 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 TAS2R41P59536 307 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 SLC25A3Q00325 362 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 LTBQ06643 244 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 MS4A18Q3C1V0 323 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 AGAP6Q5VW22 663 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 ANKRD16Q6P6B7 361 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 DEF8Q6ZN54 512 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 MAGEE2Q8TD90 523 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-201ENST00000344376 OR2M2Q96R28 347 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 CCT8L2Q96SF2 557 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 ELAC2Q9BQ52 826 aaKnown RBP14.07□□□□□ -0.16
ATG4B-201ENST00000344376 BDH2Q9BUT1 245 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 FAM107BQ9H098 131 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 EFCAB1Q9HAE3 211 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 B3GAT2Q9NPZ5 323 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 NANSQ9NR45 359 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 USP22Q9UPT9 525 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 ROS1P08922 2347 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 PRR14LQ5THK1 2151 aa14.07□□□□□ -0.16
ATG4B-201ENST00000344376 ZNF726A6NNF4 738 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 LRRN3E7EW58 273 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 RPL36A-HNRNPH2H7BZ11 118 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-201ENST00000344376 PLPP3O14495 311 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 HPRP00739 348 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 HIST1H2ABP04908 130 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 ADORA3P0DMS8 318 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 HOXB1P14653 301 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-201ENST00000344376 KDELR2P33947 212 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 SPOCK1Q08629 439 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 PGGHGQ32M88 737 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 CYBRD1Q53TN4 286 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 WDR88Q6ZMY6 472 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 HIST3H2AQ7L7L0 130 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 PXKQ7Z7A4 578 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 BIVMQ86UB2 503 aa14.06□□□□□ -0.16
ATG4B-201ENST00000344376 TMEM123Q8N131 208 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms