RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 EIF3KQ9UBQ5 218 aaKnown RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 TMEFF2Q9UIK5 374 aaPredicted RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 GPR55Q9Y2T6 319 aaPredicted RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 FAM166BA8MTA8 275 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 H0YC42 278 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 CYR61O00622 381 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SBK2P0C263 348 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ENPP1P22413 925 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 FOXK1P85037 733 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 EIF3IQ13347 325 aaKnown RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 TMED4Q7Z7H5 227 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 OR8S1Q8NH09 359 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SPACA9Q96E40 222 aaPredicted RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 DMRTB1Q96MA1 342 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 C1orf198Q9H425 327 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 CDH20Q9HBT6 801 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 PLCXD1Q9NUJ7 323 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 A0A1W2PNR3 127 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ISPDA4D126 451 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 GABRPO00591 440 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SCG5P05408 212 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 TMEM225BP0DP42 221 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 IFNGR1P15260 489 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 FGFBP1Q14512 234 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 OLFML2AQ68BL7 652 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 HBMQ6B0K9 141 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 NPRL2Q8WTW4 380 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 CCDC107Q8WV48 283 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 TRIM63Q969Q1 353 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ANKRD9Q96BM1 317 aaPredicted RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 D6RAR5 112 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 GLCEO94923 617 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 HIST1H1CP16403 213 aaKnown RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 JUNBP17275 347 aaPredicted RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 LIPAP38571 399 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 CD97P48960 835 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 RPL27P61353 136 aaKnown RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 SNTB2Q13425 540 aaKnown RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 ZNF181Q2M3W8 571 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 C11orf91Q3C1V1 193 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 WDR76Q9H967 626 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 ZNF281Q9Y2X9 895 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 VWA8A3KMH1 1905 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 A6NLC8 198 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 CTDSP2O14595 271 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 IL1AP01583 271 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 CCL4P13236 92 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 FKBP2P26885 142 aaKnown RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 GABRA5P31644 462 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 MAP2K3P46734 347 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 CCDC92Q53HC0 331 aaPredicted RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 WDR5BQ86VZ2 330 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 DRAXINQ8NBI3 349 aaPredicted RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 SLC25A44Q96H78 314 aaPredicted RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 CHIAQ9BZP6 476 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 CKAP5Q14008 2032 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 GPR171O14626 319 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 SEC14L2O76054 403 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 RPS25P62851 125 aaKnown RBP12.5□□□□□ -0.41
DDX54-202ENST00000314045 ACKR1Q16570 336 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 PLCZ1Q86YW0 608 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 DEFB124Q8NES8 71 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 CENPOQ9BU64 300 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 SCP2D1Q9UJQ7 156 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
DDX54-202ENST00000314045 GTF2F2P13984 249 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 VAMP1P23763 118 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 CAPZA1P52907 286 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ARPC4P59998 168 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 PRKCDQ05655 676 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 RPL18Q07020 188 aaKnown RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 CNIH2Q6PI25 160 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 SGCDQ92629 289 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 OCIAD1Q9NX40 245 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 MEP1BQ16820 701 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 C16orf47Q6ZP98 133 aaPredicted RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 LINC00346Q8IVM7 164 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 LRRC18Q8N456 261 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 OR52N1Q8NH53 320 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 BRIX1Q8TDN6 353 aaKnown RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 DNASE2BQ8WZ79 361 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 RADILQ96JH8 1075 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ZNF681Q96N22 645 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 NEDD4LQ96PU5 975 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 MNTQ99583 582 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ZNF226Q9NYT6 803 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ACOD1A6NK06 481 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 FOXS1O43638 330 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 TBXA2RP21731 343 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 PITPNBP48739 271 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms