RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ARMCX1Q9P291 453 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 BAG5Q9UL15 447 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 ROS1P08922 2347 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 TRAPPC13A5PLN9 417 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 OVOL3O00110 214 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 CCDC22O60826 627 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 INHBBP09529 407 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 CRYBA2P53672 197 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 SLC25A3Q00325 362 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 ROR2Q01974 943 aaKnown RBP23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 PMS2P3Q13401 168 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 HIKESHIQ53FT3 197 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 TTC33Q6PID6 262 aaPredicted RBP23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 RBM45Q8IUH3 476 aaKnown RBP23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 PIK3C3Q8NEB9 887 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 OR4D11Q8NGI4 311 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 RP9Q8TA86 221 aaKnown RBP23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 MPP4Q96JB8 637 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 ZNF583Q96ND8 569 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 MOGAT1Q96PD6 335 aa23.15■■□□□ 1.3
CDKN2A-201ENST00000304494 FLNAP21333 2647 aaKnown RBP23.14■■□□□ 1.3
CDKN2A-201ENST00000304494 MS4A18H0YCH9 400 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 PTNP21246 168 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 UBE2NP61088 152 aaKnown RBP23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 LTBQ06643 244 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 PUDPQ08623 228 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 MS4A18Q3C1V0 323 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 TBRG1Q3YBR2 411 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 LINGO2Q7L985 606 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 GPR137CQ8N3F9 429 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 GRIP2Q9C0E4 1043 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 FKRPQ9H9S5 495 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 SLC7A7Q9UM01 511 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 AP3M1Q9Y2T2 418 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 NOX1Q9Y5S8 564 aa23.14■■□□□ 1.29
CDKN2A-201ENST00000304494 FAM220BPB1ANY3 271 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 RPL36A-HNRNPH2H7BZ11 118 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 TRAF3IP2O43734 574 aaPredicted RBP23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 SPOCK1Q08629 439 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 AGAP6Q5VW22 663 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 ANKRD16Q6P6B7 361 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 ARPINQ7Z6K5 226 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 DTX2Q86UW9 622 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 OR2T12Q8NG77 320 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 MAGEE2Q8TD90 523 aaPredicted RBP23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 RCN3Q96D15 328 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 OR2M2Q96R28 347 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 TRAF4Q9BUZ4 470 aaPredicted RBP23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 SLC19A3Q9BZV2 496 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 MOV10Q9HCE1 1003 aaKnown RBP23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 SH3GLB1Q9Y371 365 aa23.13■■□□□ 1.29
CDKN2A-201ENST00000304494 FAM171A2A8MVW0 826 aa23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 HOXB1P14653 301 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 POU3F1Q03052 451 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 ETFDHQ16134 617 aa23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 WDR88Q6ZMY6 472 aa23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 POU5F2Q8N7G0 328 aa23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 OR5J2Q8NH18 312 aa23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 BCL2L2Q92843 193 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 DHRS9Q9BPW9 319 aa23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 POLR2J2Q9GZM3 115 aaKnown RBP23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 POLR2J3Q9H1A7 115 aaKnown RBP23.12■■□□□ 1.29
CDKN2A-201ENST00000304494 ARPC4-TTLL3A0A0A6YYG9 625 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 E7EQL1 145 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 PLPP3O14495 311 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 LYPD3O95274 346 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 HPRP00739 348 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 THY1P04216 161 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 CDKN1AP38936 164 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 PXKQ7Z7A4 578 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 CARM1Q86X55 608 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 TMEM123Q8N131 208 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 COX4I2Q96KJ9 171 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 GSX1Q9H4S2 264 aaPredicted RBP23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 GPR35Q9HC97 309 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 USP22Q9UPT9 525 aa23.11■■□□□ 1.29
CDKN2A-201ENST00000304494 ARID1AO14497 2285 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 LRRN3E7EW58 273 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 H7C1Q1 480 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 OR6A2O95222 327 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 CD8AP01732 235 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 HLA-DOBP13765 273 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 AHCYP23526 432 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 ZNF74Q16587 644 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 LRR1Q96L50 414 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 ZNF426Q9BUY5 554 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 CRLF2Q9HC73 371 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 NANSQ9NR45 359 aa23.1■■□□□ 1.29
CDKN2A-201ENST00000304494 MTORP42345 2549 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ZFHX3Q15911 3703 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ELOVL7A1L3X0 281 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ADORA3P0DMS8 318 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 COX4I1P13073 169 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 KDELR2P33947 212 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 TTKP33981 857 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 TAS2R41P59536 307 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ARF1P84077 181 aaKnown RBP23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 LRRC23Q53EV4 343 aaPredicted RBP23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ZNF544Q6NX49 715 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 SPATA21Q7Z572 469 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms