RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 KIR2DL3P43628 341 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 CHRNB3Q05901 458 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 C1DQ13901 141 aaKnown RBP23.78■■□□□ 1.4
SSU72-201ENST00000291386 FAM98BQ52LJ0 330 aaKnown RBP23.78■■□□□ 1.4
SSU72-201ENST00000291386 ZNF730Q6ZMV8 503 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 CCDC121Q6ZUS5 278 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.78■■□□□ 1.4
SSU72-201ENST00000291386 UEVLDQ8IX04 471 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 HDHD5Q9BXW7 423 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 OR6C65A6NJZ3 312 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 ZNF432O94892 652 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 OR6A2O95222 327 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 ADAP00813 363 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 ADORA3P0DMS8 318 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 HOXB6P17509 224 aaKnown RBP23.77■■□□□ 1.4
SSU72-201ENST00000291386 SNTB1Q13884 538 aaKnown RBP23.77■■□□□ 1.4
SSU72-201ENST00000291386 FLOT2Q14254 428 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 SFRP5Q5T4F7 317 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 PODNL1Q6PEZ8 512 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 TBPL2Q6SJ96 375 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 ASRGL1Q7L266 308 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 NANOGNBQ7Z5D8 188 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 FAM222BQ8WU58 562 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 NBPF19A0A087WUL8 3843 aa23.77■■□□□ 1.4
SSU72-201ENST00000291386 AKAP8O43823 692 aaKnown RBP23.76■■□□□ 1.39
SSU72-201ENST00000291386 HLA-DOBP13765 273 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 COX5AP20674 150 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 CLDN17P56750 224 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 ITGADQ13349 1161 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 TMPRSS11FQ6ZWK6 438 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 RRM2BQ7LG56 351 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 CXorf67Q86X51 503 aaPredicted RBP23.76■■□□□ 1.39
SSU72-201ENST00000291386 ADGRG5Q8IZF4 528 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 POMGNT2Q8NAT1 580 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 MARVELD3Q96A59 401 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 DACH2Q96NX9 599 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 SLCO5A1Q9H2Y9 848 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 CRIM1Q9NZV1 1036 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 NDRG3Q9UGV2 375 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 TESMINQ9Y4I5 508 aa23.76■■□□□ 1.39
SSU72-201ENST00000291386 TRBV4-1A0A0J9YWV2 114 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 PDLIM1O00151 329 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 KRT36O76013 467 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 GADD45GO95257 159 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 RAP2AP10114 183 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 PPP3CBP16298 524 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 MAKP20794 623 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 AHCYP23526 432 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 SELENOPP49908 381 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 HMGA2P52926 109 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 IL1RL1Q01638 556 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 SPIBQ01892 262 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 POU3F1Q03052 451 aaPredicted RBP23.75■■□□□ 1.39
SSU72-201ENST00000291386 ANKDD1AQ495B1 522 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 FGD3Q5JSP0 725 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 TSPO2Q5TGU0 170 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 NIPAL3Q6P499 406 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 CDK20Q8IZL9 346 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 ANKK1Q8NFD2 765 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 LINC01560Q8TB33 94 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 USB1Q9BQ65 265 aaKnown RBP23.75■■□□□ 1.39
SSU72-201ENST00000291386 LINC00470Q9BZP3 86 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 SLC7A10Q9NS82 523 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 ASB6Q9NWX5 421 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.75■■□□□ 1.39
SSU72-201ENST00000291386 TMEM5Q9Y2B1 443 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 HIF3AQ9Y2N7 669 aa23.75■■□□□ 1.39
SSU72-201ENST00000291386 EPXP11678 715 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 IGHV1-2P23083 117 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 RRM2P31350 389 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 LIMS1P48059 325 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 SLC9A3P48764 834 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 ZNF295-AS1Q8N0V1 137 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 UBE2J2Q8N2K1 259 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 STEAP2Q8NFT2 490 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 OR52J3Q8NH60 311 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 C14orf79Q96F83 325 aa23.74■■□□□ 1.39
SSU72-201ENST00000291386 TCRBV3S1A0A5B6 114 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 DHRS12A0PJE2 317 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 SH3PXD2BA1X283 911 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 SH3D21A4FU49 640 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 BLOC1S5-TXNDC5H3BN57 136 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 IGHV3-9P01782 118 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 RPS4XP62701 263 aaKnown RBP23.73■■□□□ 1.39
SSU72-201ENST00000291386 RPL18Q07020 188 aaKnown RBP23.73■■□□□ 1.39
SSU72-201ENST00000291386 SEC23BQ15437 767 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 OR4K5Q8NGD3 323 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 WFIKKN1Q96NZ8 548 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 UPB1Q9UBR1 384 aa23.73■■□□□ 1.39
SSU72-201ENST00000291386 EFCAB9A8MZ26 197 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 C11orf98E9PRG8 122 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 RNF13O43567 381 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 SLC43A1O75387 559 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 OMPP47874 163 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 FAPQ12884 760 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 DAZAP2Q15038 168 aaPredicted RBP23.72■■□□□ 1.39
SSU72-201ENST00000291386 ABHD12BQ7Z5M8 362 aaPredicted RBP23.72■■□□□ 1.39
SSU72-201ENST00000291386 TMEM123Q8N131 208 aa23.72■■□□□ 1.39
SSU72-201ENST00000291386 ZNF433Q8N7K0 673 aaPredicted RBP23.72■■□□□ 1.39
SSU72-201ENST00000291386 CANT1Q8WVQ1 401 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms