RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 SCN1BQ07699 218 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 ISXQ2M1V0 245 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 SLC35D3Q5M8T2 416 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 BICRALQ6AI39 1079 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 OR6V1Q8N148 313 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 NFAM1Q8NET5 270 aaPredicted RBP17.48■□□□□ 0.39
BRAF-201ENST00000288602 SMIM19Q96E16 107 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 SYT4Q9H2B2 425 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 B3GAT2Q9NPZ5 323 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 RASD1Q9Y272 281 aa17.48■□□□□ 0.39
BRAF-201ENST00000288602 IGLV3-12A0A075B6K2 115 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 TMED7-TICAM2A0A0A6YYA0 188 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 TFECO14948 347 aaPredicted RBP17.47■□□□□ 0.39
BRAF-201ENST00000288602 IGF2P01344 180 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 COL28A1Q2UY09 1125 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 PXKQ7Z7A4 578 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 ADGRG3Q86Y34 549 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 GDPD1Q8N9F7 314 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 EXD3Q8N9H8 876 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 GPR119Q8TDV5 335 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 HSD17B8Q92506 261 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 OR14A2Q96R54 314 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 MMP28Q9H239 520 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 PPP1R3EQ9H7J1 279 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 RXFP3Q9NSD7 469 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 TMED7Q9Y3B3 224 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 TNRC6BQ9UPQ9 1833 aaKnown RBP17.47■□□□□ 0.39
BRAF-201ENST00000288602 ADAM10O14672 748 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 OGG1O15527 345 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 ARHGEF9O43307 516 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 RPP14O95059 124 aaKnown RBP17.47■□□□□ 0.39
BRAF-201ENST00000288602 ANKRD34CP0C6C1 535 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 MYL9P24844 172 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 HBMQ6B0K9 141 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 SFXN4Q6P4A7 337 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 MZT2AQ6P582 158 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 PAPD4Q6PIY7 484 aaKnown RBP17.47■□□□□ 0.39
BRAF-201ENST00000288602 SYS1Q8N2H4 156 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 Q8N402 240 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 GALNT6Q8NCL4 622 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 IL17RDQ8NFM7 739 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 ATOH1Q92858 354 aaPredicted RBP17.47■□□□□ 0.39
BRAF-201ENST00000288602 PTDSS2Q9BVG9 487 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 C11orf54Q9H0W9 315 aaPredicted RBP17.47■□□□□ 0.39
BRAF-201ENST00000288602 FKRPQ9H9S5 495 aa17.47■□□□□ 0.39
BRAF-201ENST00000288602 TRBV11-1A0A0K0K1C0 115 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 OR6C70A6NIJ9 312 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 THBS2P35442 1172 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 RPS11P62280 158 aaKnown RBP eCLIP17.46■□□□□ 0.39
BRAF-201ENST00000288602 PM20D2Q8IYS1 436 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 IFI44Q8TCB0 444 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 METTL21AQ8WXB1 218 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 SOSTQ9BQB4 213 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 ING1Q9UK53 422 aaPredicted RBP17.46■□□□□ 0.39
BRAF-201ENST00000288602 CLEC4AQ9UMR7 237 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 PCDHGB2Q9Y5G2 931 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 TRAV36DV7A0A075B6V5 113 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 A0A0B4J203 849 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 A0A0G2JK05 382 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 TDGF1P13385 188 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 LCN1P31025 176 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 EMP2P54851 167 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 NANOS3P60323 173 aaKnown RBP17.46■□□□□ 0.39
BRAF-201ENST00000288602 TRAM1Q15629 374 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 FAM199XQ6PEV8 388 aaPredicted RBP17.46■□□□□ 0.39
BRAF-201ENST00000288602 PPP1R3BQ86XI6 285 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 KDM8Q8N371 416 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 SETD6Q8TBK2 473 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 SEMA4CQ9C0C4 833 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 WDR76Q9H967 626 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 SUSD2Q9UGT4 822 aa17.46■□□□□ 0.39
BRAF-201ENST00000288602 CCDC163A0A0D9SF12 145 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 TMEM200CA6NKL6 621 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 EIF4EP06730 217 aaKnown RBP17.45■□□□□ 0.38
BRAF-201ENST00000288602 OR8G3PP0DMU2 310 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 CD53P19397 219 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 IL11P20809 199 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 TMED10P49755 219 aaKnown RBP17.45■□□□□ 0.38
BRAF-201ENST00000288602 SELENBP1Q13228 472 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 SQSTM1Q13501 440 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 WDR5BQ86VZ2 330 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 MAML2Q8IZL2 1156 aaPredicted RBP17.45■□□□□ 0.38
BRAF-201ENST00000288602 MS4A15Q8N5U1 240 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 SAMD12Q8N8I0 201 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 WDR77Q9BQA1 342 aaPredicted RBP17.45■□□□□ 0.38
BRAF-201ENST00000288602 C12orf10Q9HB07 376 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 TAS2R10Q9NYW0 307 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 EXTL2Q9UBQ6 330 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 HTR3EA5X5Y0 456 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 PLA2G10O15496 165 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 LAMTOR5O43504 91 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 HOXD12P35452 270 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 OVCH1Q7RTY7 1134 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.45■□□□□ 0.38
BRAF-201ENST00000288602 ADAD1Q96M93 576 aaKnown RBP17.45■□□□□ 0.38
BRAF-201ENST00000288602 MED11Q9P086 117 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 VDAC3Q9Y277 283 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 SLC6A5Q9Y345 797 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 HRH3Q9Y5N1 445 aa17.45■□□□□ 0.38
BRAF-201ENST00000288602 A0A0G2JMP0 313 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms