RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 AADACL4Q5VUY2 407 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 TMEM81Q6P7N7 255 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 LSRQ86X29 649 aaPredicted RBP22.13■■□□□ 1.13
SSBP4-201ENST00000270061 CCDC120Q96HB5 630 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 DEFB127Q9H1M4 99 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 TAS2R10Q9NYW0 307 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 PRRG2O14669 202 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 GLSO94925 669 aaPredicted RBP22.12■■□□□ 1.13
SSBP4-201ENST00000270061 NDUFB2O95178 105 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 CXCR1P25024 350 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 PTGDSP41222 190 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 HTR3AP46098 478 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 POLR2HP52434 150 aaKnown RBP22.12■■□□□ 1.13
SSBP4-201ENST00000270061 RPS4XP62701 263 aaKnown RBP22.12■■□□□ 1.13
SSBP4-201ENST00000270061 ZNF74Q16587 644 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 ARHGAP11AQ6P4F7 1023 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 GRINAQ7Z429 371 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 TMEM234Q8WY98 164 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 RFKQ969G6 155 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 ISOC1Q96CN7 298 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 IFT27Q9BW83 186 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 ZDHHC11Q9H8X9 412 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 PLSCR2Q9NRY7 297 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.12■■□□□ 1.131e-6■■■■□ 19.8
SSBP4-201ENST00000270061 GPR52Q9Y2T5 361 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 TP53I11O14683 189 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 PTGS2P35354 604 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 TMBIM6P55061 237 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 FOXO1Q12778 655 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 ANKDD1AQ495B1 522 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 GPR107Q5VW38 600 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 NXNL2Q5VZ03 156 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 FGD2Q7Z6J4 655 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 ST8SIA1Q92185 356 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 TMEM80Q96HE8 168 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 SECISBP2Q96T21 854 aaKnown RBP22.12■■□□□ 1.13
SSBP4-201ENST00000270061 CMC2Q9NRP2 79 aa22.12■■□□□ 1.13
SSBP4-201ENST00000270061 CELSR2Q9HCU4 2923 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 IRGMA1A4Y4 181 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 SNTA1Q13424 505 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 KLHL22Q53GT1 634 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 HIST2H2BCQ6DN03 193 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 FAM109AQ8N4B1 249 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 TMEM251Q8N6I4 163 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 YIPF3Q9GZM5 350 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 GALNT9Q9HCQ5 603 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 KLRF1Q9NZS2 232 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 COMMD3-BMI1R4GMX3 469 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 CACNA1CQ13936 2221 aa22.11■■□□□ 1.13
SSBP4-201ENST00000270061 CYSRT1A8MQ03 144 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 TRMUO75648 421 aaKnown RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 PEPDP12955 493 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 CASP3P42574 277 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 MAGEA5P43359 124 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 PRPS1P60891 318 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 HYAL4Q2M3T9 481 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 DOLPP1Q86YN1 238 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 LRRC17Q8N6Y2 441 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 NMD3Q96D46 503 aaKnown RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 METTL7AQ9H8H3 244 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 BOKQ9UMX3 212 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 WIF1Q9Y5W5 379 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 ETV2O00321 342 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 GMFGO60234 142 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 SLC2A10O95528 541 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 RAB40BQ12829 278 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 B3GNT6Q6ZMB0 384 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 ADGRG3Q86Y34 549 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 GPX7Q96SL4 187 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 PROK2Q9HC23 129 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 FGF20Q9NP95 211 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 HINT3Q9NQE9 182 aaKnown RBP22.1■■□□□ 1.13
SSBP4-201ENST00000270061 NANSQ9NR45 359 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 HIF3AQ9Y2N7 669 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 MEMO1Q9Y316 297 aa22.1■■□□□ 1.13
SSBP4-201ENST00000270061 CACNA1DQ01668 2161 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 TMED7-TICAM2A0A0A6YYA0 188 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 LRRN3E7EW58 273 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 TPOP07202 933 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 ASAH2BP0C7U1 165 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 GSTT1P30711 240 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 C5orf46Q6UWT4 87 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 RPTNQ6XPR3 784 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 DPY19L2P2Q6ZN68 376 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 FAM57AQ8TBR7 257 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 CXorf56Q9H5V9 222 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 ZFP64Q9NPA5 681 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 PTTG2Q9NZH5 202 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 PPP4R1LQ9P1A2 415 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 CHRNA9Q9UGM1 479 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 DIMT1Q9UNQ2 313 aaKnown RBP22.09■■□□□ 1.13
SSBP4-201ENST00000270061 TMED7Q9Y3B3 224 aa22.09■■□□□ 1.13
SSBP4-201ENST00000270061 PHF3Q92576 2039 aaKnown RBP22.08■■□□□ 1.13
SSBP4-201ENST00000270061 TRAV36DV7A0A075B6V5 113 aa22.08■■□□□ 1.13
SSBP4-201ENST00000270061 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.08■■□□□ 1.13
SSBP4-201ENST00000270061 ANKRD33BA6NCL7 494 aa22.08■■□□□ 1.13
SSBP4-201ENST00000270061 B4DXG7 233 aa22.08■■□□□ 1.13
SSBP4-201ENST00000270061 NPIPB7O75200 414 aa22.08■■□□□ 1.13
SSBP4-201ENST00000270061 LCKP06239 509 aa22.08■■□□□ 1.13
SSBP4-201ENST00000270061 ADRA2AP08913 450 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms