RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TMEM43Q9BTV4 400 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 MROQ9BYG7 248 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 FKRPQ9H9S5 495 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 EXOSC3Q9NQT5 275 aaKnown RBP8.46□□□□□ -1.06
SSR3-201ENST00000265044 IGLV3-12A0A075B6K2 115 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 KDM4EB2RXH2 506 aaPredicted RBP8.45□□□□□ -1.06
SSR3-201ENST00000265044 MT-ATP6P00846 226 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 PCMT1P22061 227 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 CASP3P42574 277 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 CTBP2P56545 445 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 OR12D2P58182 307 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 DEFA1P59665 94 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 DEFA3P59666 94 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 GFOD2Q3B7J2 385 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ACER2Q5QJU3 275 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 IDNKQ5T6J7 187 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 VASNQ6EMK4 673 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 C3orf33Q6P1S2 294 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 OR2AJ1Q8NGZ0 328 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 WDR12Q9GZL7 423 aaKnown RBP8.45□□□□□ -1.06
SSR3-201ENST00000265044 COMMD4Q9H0A8 199 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 RBM38Q9H0Z9 239 aaKnown RBP8.45□□□□□ -1.06
SSR3-201ENST00000265044 MCCC2Q9HCC0 563 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ERVK13-1Q9NX77 482 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SLC6A5Q9Y345 797 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 CORINQ9Y5Q5 1042 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 HTR3EA5X5Y0 456 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ANKUB1A6NFN9 424 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 NPIPB9F8W1W9 429 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SELENOFO60613 162 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 GABARAPO95166 117 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 DLGAP3O95886 979 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SCG5P05408 212 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 F8A1P23610 371 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 TAS2R43P59537 309 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 GLO1Q04760 184 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 CAMK2DQ13557 499 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 LRFN4Q6PJG9 635 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 H1FNTQ75WM6 255 aaPredicted RBP8.45□□□□□ -1.06
SSR3-201ENST00000265044 SLC35D2Q76EJ3 337 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 CEACAM19Q7Z692 300 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ARL5BQ96KC2 179 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SGCZQ96LD1 299 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SH3GL3Q99963 347 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 HCAR1Q9BXC0 346 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 MALT1Q9UDY8 824 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 PEX16Q9Y5Y5 336 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 TMEM14AQ9Y6G1 99 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 A0A1W2PQD3 144 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 PMS2P1A4D2B8 440 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 TO15178 435 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 IFNGR1P15260 489 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SDHAP31040 664 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 EIF1P41567 113 aaKnown RBP8.45□□□□□ -1.06
SSR3-201ENST00000265044 CCL11P51671 97 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ACTA2P62736 377 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ACTG2P63267 376 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 SGCAQ16586 387 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 MOGQ16653 247 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 MRPL14Q6P1L8 145 aaKnown RBP8.45□□□□□ -1.06
SSR3-201ENST00000265044 MZT2AQ6P582 158 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 FAM198BQ6UWH4 519 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 C5orf46Q6UWT4 87 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 FAM131AQ6UXB0 335 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 C17orf47Q8NEP4 570 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 MED29Q9NX70 200 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 ICAM5Q9UMF0 924 aa8.45□□□□□ -1.06
SSR3-201ENST00000265044 CDX4O14627 284 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 IDH3BO43837 385 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 FTH1P19P0C7X4 201 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 SPI1P17947 270 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 ADH7P40394 386 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 DAP3P51398 398 aaKnown RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 BIDP55957 195 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 TGIF1Q15583 401 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 ZNF322Q6U7Q0 402 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 OR8K3Q8NH51 312 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 INTS14Q96SY0 518 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 RTN4RQ9BZR6 473 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 PLA2G3Q9NZ20 509 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 ZNF223Q9UK11 482 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 CAB39Q9Y376 341 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 MRPS18BQ9Y676 258 aaKnown RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 APC2O95996 2303 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 IGHV1-45A0A0A0MS14 117 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 BHLHE40O14503 412 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 TBX1O43435 398 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 GABRB1P18505 474 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 CRABP1P29762 137 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 ARMC4Q5T2S8 1044 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 AADACL4Q5VUY2 407 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 KCTD18Q6PI47 426 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 TMEM205Q6UW68 189 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 ADGRG3Q86Y34 549 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 CROCCP3Q8IVE0 287 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 PHC2Q8IXK0 858 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 NAA11Q9BSU3 229 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 FOXJ2Q9P0K8 574 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 KLHL13Q9P2N7 655 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms