RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 NICN1Q9BSH3 213 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 TPSD1Q9BZJ3 242 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 LINC00597Q9H2U6 94 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 MTHFD2LQ9H903 347 aaPredicted RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF281Q9Y2X9 895 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 FGF7P21781 194 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 LAP3P28838 519 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 CCR7P32248 378 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 C19orf57Q0VDD7 668 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 XAF1Q6GPH4 301 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 TMEM225Q6GV28 225 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 RPL22L1Q6P5R6 122 aaKnown RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 TP53I13Q8NBR0 393 aaPredicted RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 OR52I2Q8NH67 350 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 OR1A2Q9Y585 309 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 CHD4Q14839 1912 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 C5P01031 1676 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 OTOL1A6NHN0 477 aaPredicted RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 IL33O95760 270 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 MT-ND4LP03901 98 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 SPOCK1Q08629 439 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 PAQR6Q6TCH4 344 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF322Q6U7Q0 402 aaPredicted RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 GTF2H5Q6ZYL4 71 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 RHOUQ7L0Q8 258 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 CSF3RQ99062 836 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 SPOCK3Q9BQ16 436 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF559Q9BR84 538 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 FTSJ1Q9UET6 329 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 FEZF1A0PJY2 475 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 TMEM225BP0DP42 221 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 MGST1P10620 155 aaKnown RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 MRPL49Q13405 166 aaKnown RBP10.17□□□□□ -0.78
DCLK1-201ENST00000255448 TMEM174Q8WUU8 243 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF566Q969W8 418 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 POM121Q96HA1 1249 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 DOK1Q99704 481 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ZFYVE21Q9BQ24 234 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 KATNB1Q9BVA0 655 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 LMAN1LQ9HAT1 526 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 ISYNA1Q9NPH2 558 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 EHFQ9NZC4 300 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 KLHL42Q9P2K6 505 aa10.17□□□□□ -0.78
DCLK1-201ENST00000255448 KCNK5O95279 499 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 PTBP3O95758 552 aaKnown RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 MGMTP16455 207 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 CLRN1P58418 232 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 CNTN4Q8IWV2 1026 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 RDH10Q8IZV5 341 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 APH1BQ8WW43 257 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 LPAR4Q99677 370 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 WDR83Q9BRX9 315 aaKnown RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 BCO1Q9HAY6 547 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 TREX1Q9NSU2 369 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 A0A087X0M5 115 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 A0A1B0GX30 115 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 NPIPA2E9PIF3 369 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 NPIPA3F8WFD2 350 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 SCO2O43819 266 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 QDPRP09417 244 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF28P17035 718 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 TACR1P25103 407 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 CALCRP30988 508 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 RAB11AP62491 216 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 DSC1Q08554 894 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF836Q6ZNA1 936 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 KLHDC8AQ8IYD2 350 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF681Q96N22 645 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 CLSTN3Q9BQT9 956 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 IL26Q9NPH9 171 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 TM7SF3Q9NS93 570 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 TRAV27A0A087WT01 109 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 C20orf202A1L168 122 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 A6NCN8 305 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 OR5H14A6NHG9 310 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 NSA2O95478 260 aaKnown RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 CCNOP22674 350 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 HOXA1P49639 335 aaPredicted RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 ARL6IP1Q15041 203 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 FBXL6Q8N531 539 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 ATF6BQ99941 703 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 NDUFB11Q9NX14 153 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 CSAG2Q9Y5P2 127 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 USP3Q9Y6I4 520 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 H3BQ06 376 aaPredicted RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 GPRIN2O60269 458 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 SMIM6P0DI80 62 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 COL9A2Q14055 689 aaPredicted RBP10.16□□□□□ -0.78
DCLK1-201ENST00000255448 SERTAD2Q14140 314 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 SGCAQ16586 387 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 ZNF542PQ5EBM4 170 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 Q6ZRG5 221 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 Q6ZSR9 355 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 LRRTM1Q86UE6 522 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 TMEM18Q96B42 140 aa10.16□□□□□ -0.78
DCLK1-201ENST00000255448 MEGF10Q96KG7 1140 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms