RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ADAMTS5Q9UNA0 930 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 GRPP07492 148 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 AFF3P51826 1226 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 DUSP7Q16829 419 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 CTU2Q2VPK5 515 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 MYEOVQ96EZ4 313 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 HHATLQ9HCP6 504 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 HRASLSQ9HDD0 168 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 IGHV3-15A0A0B4J1V0 119 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 DPM1O60762 260 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 DRD1P21728 446 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 TAS2R19P59542 299 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 KIAA1024LP59773 190 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 RPL23AP62750 156 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 FOXK2Q01167 660 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 BAXQ07812 192 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 EDDM3AQ14507 147 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 ARHGAP19Q14CB8 494 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 C2CD4CQ8TF44 421 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF355PQ9NSJ1 428 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 TTLL8A6PVC2 850 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 CNN3Q15417 329 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 OR1J4Q8NGS1 313 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 UBXN10Q96LJ8 280 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 PTDSS2Q9BVG9 487 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 MARCH5Q9NX47 278 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 MCTS1Q9ULC4 181 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 TOR1AO14656 332 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 SIGLEC6O43699 453 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 ARHGEF15O94989 841 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 CD38P28907 300 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 OPRD1P41143 372 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 RHOXF1Q8NHV9 184 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 TAAR8Q969N4 342 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF566Q969W8 418 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 FOXQ1Q9C009 403 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 SEMA4CQ9C0C4 833 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 C20orf85Q9H1P6 137 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 PCDHB10Q9UN67 800 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 A0A1W2PS29 197 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 TIMM8AO60220 97 aaPredicted RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 AKR7A3O95154 331 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 PTGER4P35408 488 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 RRAS2P62070 204 aaPredicted RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC16A11Q8NCK7 471 aa12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF587Q96SQ5 575 aaPredicted RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 MRPS28Q9Y2Q9 187 aaKnown RBP12.59□□□□□ -0.39
TGFBR3-201ENST00000212355 PLSCR5A0PG75 271 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 GPR85P60893 370 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 GLYR1Q49A26 553 aaPredicted RBP12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 OR51D1Q8NGF3 324 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 AMDHD1Q96NU7 426 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 CNTNAP3Q9BZ76 1288 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 TMEM231Q9H6L2 316 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 WDR76Q9H967 626 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 GFOD1Q9NXC2 390 aa12.58□□□□□ -0.39
TGFBR3-201ENST00000212355 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 PRAMEF4O60810 478 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 MRPL33O75394 65 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 IL2RGP31785 369 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 SERPINF1P36955 418 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 RPS19P39019 145 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 HNRNPFP52597 415 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 OR10A3P58181 314 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 TSPAN31Q12999 210 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 HTR4Q13639 388 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 ZNF169Q14929 603 aaPredicted RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 TRMT12Q53H54 448 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 OR2B11Q5JQS5 317 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 ADAMTS18Q8TE60 1221 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 OPCMLQ14982 345 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 SLCO4C1Q6ZQN7 724 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 SPRED1Q7Z699 444 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 H1FXQ92522 213 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 RHNO1Q9BSD3 238 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 OCEL1Q9H607 264 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 NTN4Q9HB63 628 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 FAM221AA4D161 298 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 FITM1A5D6W6 292 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 HTR2CP28335 458 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 CCL11P51671 97 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 FAM83HQ6ZRV2 1179 aaPredicted RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 MBOAT2Q6ZWT7 520 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 DUSP13Q9UII6 198 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 LTBP3Q9NS15 1303 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 TBCEQ15813 527 aaPredicted RBP12.58□□□□□ -0.4
TGFBR3-201ENST00000212355 LRRC26Q2I0M4 334 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms