RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Bcl9Q9D219 1425 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr329-psM9MMK4 331 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Grcc10O35127 126 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rpp30O88796 268 aaKnown RBP11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm5460Q3UQ97 254 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1225Q7TR01 311 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pggt1bQ8BUY9 377 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mef2cQ8CFN5 474 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rdh1Q8CGV4 317 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ms4a4cQ9D3F6 226 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tlr1Q9EPQ1 795 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr573-ps1A0A1B0GRU2 297 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm12695A2AGB2 545 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm43191F6YIH5 235 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn2r58K7N6V2 862 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 AlyrefO08583 255 aaKnown RBP11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 P01650 108 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 P01653 108 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Stfa1P35175 97 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dynlrb1P62627 96 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pla2g7Q60963 440 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sort1Q6PHU5 825 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1275Q7TQY8 312 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1133Q7TR44 313 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Isca2Q9DCB8 154 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sgk3Q9ERE3 496 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Nup98Q6PFD9 1816 aaKnown RBP11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn2r69G3XA45 850 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sh3yl1O08641 340 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 GbaP17439 515 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bmp5P49003 452 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sec61a1P61620 476 aaKnown RBP11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cds1P98191 461 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sema3bQ62177 748 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Eid2Q6X7S9 236 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 CpmQ80V42 443 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem163Q8C996 288 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1312Q8VF10 317 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc35b2Q91ZN5 431 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Nox4Q9JHI8 578 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tacr3P47937 452 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Opn1swP51491 346 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Osgin2Q3TEE9 550 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 AY761185Q5ERI8 94 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Irf4Q64287 450 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lacc1Q8BZT9 430 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr161Q8VGB9 313 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Subh2bvQ9D9Z7 123 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pcm1Q9R0L6 2025 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr316A0A0N4SVP2 306 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 9130204L05RikG3UWB8 92 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mrps6P58064 125 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gpr15Q0VDU3 360 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Emc10Q3TAS6 258 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 CrhbpQ60571 322 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 DdnQ80TS7 710 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Supt7lQ9CZV5 412 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tdp2Q9JJX7 370 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 VapaQ9WV55 249 aaKnown RBP11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prdm13E9PZZ1 754 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fbxw15L7N1X6 466 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 KhkP97328 298 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Znf385bQ8BXJ8 482 aaKnown RBP11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r18Q8R2C8 299 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prss16Q9QXE5 509 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 SpdefQ9WTP3 325 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ak4Q9WUR9 223 aaKnown RBP11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tns2Q8CGB6 1400 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr839-ps1A0A1D5RMH6 312 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vsig10lD3YZF7 868 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fbxw24E9PXM9 466 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prpmp5E9PXN1 296 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Klrk1O54709 232 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 InhbbQ04999 411 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mtch1Q791T5 389 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem125Q8CHQ6 216 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 LhppQ9D7I5 270 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cx3cr1Q9Z0D9 354 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm42791D3YYB5 209 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm17728E9Q5K2 132 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dnajb3O35723 242 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cldn2O88552 230 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lhx3P50481 400 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prelid2Q0VBB0 177 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tubg2Q8VCK3 451 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ccdc71Q8VEG0 433 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr883Q8VF64 309 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem63aQ91YT8 804 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Abhd3Q91ZH7 411 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Siglec5Q920G3 569 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Trbv20A0A0B4J1H5 111 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Wdr5P61965 334 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Malt1Q2TBA3 832 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 PianpQ6P1B3 278 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Q8BHR8 331 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rcc2Q8BK67 520 aaKnown RBP11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mib2Q8R516 973 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr768Q8VGC4 312 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Egln3Q91UZ4 239 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 GabarapQ9DCD6 117 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms