RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Arhgap21Q6DFV3 1944 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm21865A0A087WRL2 222 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Klk1b16P04071 261 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hmgn2P09602 90 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 P18524 117 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ptx3P48759 381 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cdk5P49615 292 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tuba4aP68368 448 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mrgprb2Q3KNA1 338 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hephl1Q3V1H3 1159 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 BC030870Q3V2G4 71 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Snx33Q4VAA7 574 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr714Q7TRN0 317 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Serpina3fQ80X76 445 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Sdhaf4Q8BTE0 104 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Nudt9Q8BVU5 350 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hpf1Q8CFE2 346 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Faim2Q8K097 317 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pphln1Q8K2H1 381 aaKnown RBP7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 RorbQ8R1B8 470 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ddit4lQ8VHZ5 193 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mrgpra1Q91WW5 304 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Lnx2Q91XL2 687 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 NansQ99J77 359 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Trim13Q9CYB0 407 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Glipr2Q9CYL5 154 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Wdsub1Q9D0I6 474 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cers5Q9D6K9 414 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cdc40Q9DC48 579 aaKnown RBP7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cdc20Q9JJ66 499 aa7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 Eif3iQ9QZD9 325 aaKnown RBP7.92□□□□□ -1.14
Trim39-201ENSMUST00000042717 AcacaQ5SWU9 2345 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Dock10Q8BZN6 2150 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm28557A0A087WQQ0 336 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1056A2AVY0 313 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm3752A6NAT4 150 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Skint9A7TZG3 319 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm2663F6R7E8 247 aaKnown RBP7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm3239L7N2D9 227 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pdlim3O70209 316 aaKnown RBP7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Egr1P08046 533 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tbx5P70326 518 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 BmxP97504 651 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fxyd2Q04646 70 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fam160a2Q3U2I3 975 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm4951Q3UED7 406 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc35g3Q5F297 340 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fstl4Q5STE3 841 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Dvl2Q60838 736 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Dvl3Q61062 716 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Adam9Q61072 845 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fzd7Q61090 572 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Med22Q62276 200 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cyb561a3Q6P1H1 242 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cxcl3Q6W5C0 100 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 H2afy2Q8CCK0 372 aaKnown RBP7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Trmt6Q8CE96 497 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tsen15Q8R3W5 168 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1232Q8VEX7 311 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr108Q8VFA1 320 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr51Q8VGG9 307 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ubqln4Q99NB8 596 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 1810009J06RikQ9CPN7 247 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 HypmQ9CR04 117 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Acss2Q9QXG4 701 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tyk2Q9R117 1184 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr545Q9WU94 316 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ramp2Q9WUP0 189 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cldn14Q9Z0S3 239 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pkd1l3Q2EG98 2201 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f15A0A087WR44 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f12A0A0A0MQP3 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr560A0A1B0GSU5 314 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f9A2BFZ7 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f7A2BHG6 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f19A2CG71 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f10A2CG92 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f3A2CGC2 496 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f13B8JKF6 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm8237E9Q257 205 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm42421F6X8D5 166 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r167G3UW71 315 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm44G3UW88 330 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f2J3QMS5 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f25J3QMV9 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f6J3QMW9 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f26J3QNK2 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f24J3QNQ5 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f8J3QQ50 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f17L7MU81 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f18L7MU83 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ptpn20O55082 426 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Capns1O88456 269 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Klk1b1P00755 261 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Elk4P41158 430 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Foxk1P42128 719 aaKnown RBP7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ier3P46694 153 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tigd2Q0VBL1 525 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Btbd35f14Q1LZI5 498 aa7.91□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc2a6Q3UDF0 497 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms