RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Adck1Q9D0L4 525 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mrpl14Q9D1I6 145 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Pfn4Q9D6I3 129 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Dbf4Q9QZ41 663 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Xpr1Q9Z0U0 695 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Alms1Q8K4E0 3251 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gm15446D3Z5Y8 553 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1425K7N659 312 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Brd7O88665 651 aaKnown RBP17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 CfpP11680 464 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mmp2P33434 662 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc11a1P41251 548 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 MazP56671 477 aaKnown RBP17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lemd1Q14C37 129 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 B3gnt6Q3USF0 391 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tnfaip3Q60769 775 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Adam9Q61072 845 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tmem108Q8BHE4 574 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp101Q8BP18 612 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 ReltQ8BX43 436 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 RergQ8R367 199 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr514Q8VFZ6 310 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr790Q8VGJ3 322 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 AspnQ99MQ4 373 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lamtor1Q9CQ22 161 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Alg2Q9DBE8 415 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 PmpcaQ9DC61 524 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Unc80Q8BLN6 3261 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Dock4P59764 1978 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Egfbp2P36368 261 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Ier3P46694 153 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mapk14P47811 360 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cnn2Q08093 305 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cep76Q0VEJ0 659 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gcnt7Q3V3K7 433 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr151Q60893 309 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Nr0b1Q61066 472 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lrrn1Q61809 716 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc34a3Q80SU6 601 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tmem255aQ8BHW5 351 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cldn17Q8BXA6 224 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr769Q8K501 312 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lsm10Q8QZX5 122 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Vmn1r210Q8R274 306 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr651Q8VG78 313 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Q9CQF4 240 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 4930503E14RikQ9D583 177 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Jmjd6Q9ERI5 403 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Raet1dQ9JI58 249 aa17.23■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gm28710A0A1B0GR31 962 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp345A2AQA1 561 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp945E9PYM8 794 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Galr3O88853 370 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Camk2aP11798 478 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Klk1P15947 261 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Klk1b9P15949 261 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Il13P20109 131 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Acta2P62737 377 aaKnown RBP17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Actg2P63268 376 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fabp5Q05816 135 aaKnown RBP17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 AmbpQ07456 349 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Adh7Q64437 374 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gper1Q8BMP4 375 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 4921517D22RikQ8CET0 269 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Exosc5Q9CRA8 235 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 IqchQ9D2K4 1071 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Ift22Q9DAI2 185 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 RhouQ9EQT3 261 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Trim2Q9ESN6 744 aaKnown RBP17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1223A0A1L1SU13 311 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Ajap1A2ALI5 412 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lao1B1ARV3 523 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp707F6QUN2 391 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 DbiP31786 87 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Hsd11b1P50172 292 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Znf354aQ61751 572 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Scgb2b2Q6UGQ3 114 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Nabp1Q8BGW5 198 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Coro2bQ8BH44 480 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Or51e2Q8VBV9 320 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Glb1lQ8VC60 646 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Otud1Q9CUB6 454 aa17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zdbf2Q5SS00 2493 aaKnown RBP17.22■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 FxnO35943 207 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 EomesO54839 707 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Kcnj15O88932 375 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Nr2f6P43136 390 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Adamts15P59384 950 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Kcnab1P63143 401 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 St3gal3P97325 374 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tbccd1Q640P7 552 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lrfn5Q8BXA0 719 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Ctxn1Q8K129 82 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cd177Q8R2S8 817 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1079Q8VF52 315 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1504Q8VFQ4 315 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 BniplQ99JU7 328 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gm10762Q9CZN6 115 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 FastkQ9JIX9 511 aa17.21■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Bex2Q9WTZ8 129 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms