RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 IGLV3-32A0A0A0MS00 114 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 CDHR4A6H8M9 788 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 A8MV72 311 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 H3BNX3 289 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 GNGT2O14610 69 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 AP3D1O14617 1153 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 MGRN1O60291 552 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 RAMP1O60894 148 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 SYNGR4O95473 234 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ATP6V1G2O95670 118 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 LGI1O95970 557 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 CD8AP01732 235 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 CD3EP07766 207 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 NGFRP08138 427 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 FCGR1AP12314 374 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ITGA2P17301 1181 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 IL11P20809 199 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 FASP25445 335 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 YAP1P46937 504 aaKnown RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 VLDLRP98155 873 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 BSPH1Q075Z2 132 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 C17orf67Q0P5P2 114 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 CD226Q15762 336 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ETFDHQ16134 617 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 NRF1Q16656 503 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ZSWIM7Q19AV6 140 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 KRTAP24-1Q3LI83 254 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ZNF672Q499Z4 452 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 GLYR1Q49A26 553 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 KLHL26Q53HC5 615 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 C6orf52Q5T4I8 152 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 TFAP2EQ6VUC0 442 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 STK32CQ86UX6 486 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 COMTD1Q86VU5 262 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 RANBP3LQ86VV4 465 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 CYP4Z1Q86W10 505 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ZNF440Q8IYI8 595 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 GABRG1Q8N1C3 465 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 OR2V1Q8NHB1 315 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 POC1BQ8TC44 478 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 OIT3Q8WWZ8 545 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 CNOT9Q92600 299 aaKnown RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 HTRA1Q92743 480 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 DUS3LQ96G46 650 aaKnown RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 SH3YL1Q96HL8 342 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ARHGDIGQ99819 225 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 SRXN1Q9BYN0 137 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 DCLRE1BQ9H816 532 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 RNPEPL1Q9HAU8 725 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 ARMC1Q9NVT9 282 aa8.87□□□□□ -0.99
PHGDH-222ENST00000641587 MCTS1Q9ULC4 181 aaKnown RBP8.87□□□□□ -0.99
PHGDH-222ENST00000641587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.998e-8■■□□□ 12.2
PHGDH-222ENST00000641587 A0A1W2PQD3 144 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 DPRXA6NFQ7 191 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 CPSF4LA6NMK7 179 aaKnown RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 TMEM229AB2RXF0 380 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 ALG1L2C9J202 215 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 ADAMDEC1O15204 470 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 ZNF264O43296 627 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 SSX4O60224 188 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 BCAS1O75363 584 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 DEAF1O75398 565 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 E2F6O75461 281 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 DIRAS1O95057 198 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 NUDT14O95848 222 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 CST1P01037 141 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 SEMG1P04279 462 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 GKN3PP0CG01 181 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 UQCRBP14927 111 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 ANPEPP15144 967 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 ZNF17P17021 662 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 IL32P24001 234 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 EDNRAP25101 427 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 IFNA8P32881 189 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 RYKP34925 604 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 SFTPDP35247 375 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 TAS2R41P59536 307 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 HOXC5Q00444 222 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 SPIBQ01892 262 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 ZNF239Q16600 458 aaKnown RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 PLPPR5Q32ZL2 321 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 HBMQ6B0K9 141 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 AMIGO2Q86SJ2 522 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 RBM45Q8IUH3 476 aaKnown RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 MISPQ8IVT2 679 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 PQLC1Q8N2U9 271 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 GTPBP8Q8N3Z3 284 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 PAPD5Q8NDF8 572 aaKnown RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 STEAP2Q8NFT2 490 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 OR4D11Q8NGI4 311 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 OR6T1Q8NGN1 323 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 RNF217Q8TC41 542 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 LRTOMTQ8WZ04 291 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 C7orf34Q96L11 122 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 MCHR1Q99705 422 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 PKP2Q99959 881 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 TRAF4Q9BUZ4 470 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 RSPO3Q9BXY4 272 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-222ENST00000641587 TRIM2Q9C040 744 aa8.86□□□□□ -0.99
PHGDH-222ENST00000641587 AMBRA1Q9C0C7 1298 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms