RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 HNRNPCL4P0DMR1 293 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 UROSP10746 265 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 KRT5P13647 590 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PON1P27169 355 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PTGDSP41222 190 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 SUCLG1P53597 346 aaKnown RBP2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PGGT1BP53609 377 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 NME5P56597 212 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PRPS1P60891 318 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 RAB10P61026 200 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 IGLV3-21P80748 117 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PIGFQ07326 219 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 RGS1Q08116 209 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 NR1I3Q14994 352 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 TMED2Q15363 201 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PPP1R3AQ16821 1122 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 FAM90A2PQ658T7 463 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 RBM43Q6ZSC3 357 aaKnown RBP2.83□□□□□ -1.96
CCDC7-213ENST00000639290 KCTD9Q7L273 389 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 LRRC70Q7Z2Q7 622 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 GALNT10Q86SR1 603 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 NEK11Q8NG66 645 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 OR52B6Q8NGF0 335 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 NPIPB3Q92617 1050 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 PATZ1Q9HBE1 687 aaKnown RBP2.83□□□□□ -1.96
CCDC7-213ENST00000639290 MSL2Q9HCI7 577 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 TNFRSF19Q9NS68 423 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 C20orf141Q9NUB4 165 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 ZNRD1Q9P1U0 126 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 HAO1Q9UJM8 370 aa2.83□□□□□ -1.96
CCDC7-213ENST00000639290 FAM90A8PA6NJQ4 464 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 LYNX1G3V0Z9 82 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ANGPT2O15123 496 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 HPXP02790 462 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 JUNP05412 331 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 FBP1P09467 338 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 FAM90A13PP0C7W8 464 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 FAM90A24PP0C7X0 464 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SMIM10L1P0DMW3 83 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 LYNX1P0DP58 116 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 VSIG10L2P0DP72 767 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PRG2P13727 222 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ZNF10P21506 573 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SKIV2L2P42285 1042 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ZNF134P52741 427 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 GBX2P52951 348 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CLRN1P58418 232 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 RPS23P62266 143 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PRR5P85299 388 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 TRAF3Q13114 568 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 RIPK1Q13546 671 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CBFBQ13951 182 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 E2F2Q14209 437 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 GAMTQ14353 236 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PTPRCAPQ14761 206 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PDK3Q15120 406 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 GABRA6Q16445 453 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 TMEM44Q2T9K0 475 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 MFSD12Q6NUT3 480 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CD300LDQ6UXZ3 194 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PPP1R21Q6ZMI0 780 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SPATA21Q7Z572 469 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 GGNQ86UU5 652 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PLD3Q8IV08 490 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 LILRA2Q8N149 483 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 GVQW1Q8N7I0 195 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 FADS6Q8N9I5 356 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CPEB3Q8NE35 698 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 OR7G3Q8NG95 312 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 TMEM163Q8TC26 289 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ELMO1Q92556 727 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CPNE4Q96A23 557 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 RNF183Q96D59 192 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 IMP4Q96G21 291 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SMIM10Q96HG1 83 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CLIC6Q96NY7 704 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SLC38A2Q96QD8 506 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PTDSS2Q9BVG9 487 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CARD6Q9BX69 1037 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CDCA4Q9BXL8 241 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 OR8D2Q9GZM6 311 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CNOT10Q9H9A5 744 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 NMRK1Q9NWW6 199 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 FAM53CQ9NYF3 392 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 STEAP1Q9UHE8 339 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 RIMKLBQ9ULI2 386 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CMAHPQ9Y471 501 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 KIR2DS1A0A191URI9 304 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SMIM30A4D0T7 59 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 DBX1A6NMT0 343 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CEP104O60308 925 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ICOSLGO75144 302 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 UPK3AO75631 287 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 LYZL6O75951 148 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 TOX4O94842 621 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 FSTL3O95633 263 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 OR56A5P0C7T3 313 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ACRV1P26436 265 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PSMB5P28074 263 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ATP5OP48047 213 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms