RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 KIAA1328Q86T90 577 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 C15orf54Q8N8G6 183 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 Q8N9G6 341 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 CSNK1G2-AS1Q8NCQ2 148 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 RAB3CQ96E17 227 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 TCEAL4Q96EI5 215 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 TPD52L3Q96J77 140 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 PLIN2Q99541 437 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 TMEM43Q9BTV4 400 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 PKIBQ9C010 78 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 IMPAD1Q9NX62 359 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 RCOR3Q9P2K3 495 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 MOB4Q9Y3A3 225 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 AHCTF1Q8WYP5 2266 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 DOPEY1Q5JWR5 2465 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 ADAMTS9Q9P2N4 1935 aa4.03□□□□□ -1.76
TRAPPC9-216ENST00000634178 BOD1L1Q8NFC6 3051 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 DENND4CQ5VZ89 1909 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 METTL21EPA6NDL7 271 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 ZNF487B1APH4 448 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 PRR23D1E9PI22 279 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 MSH4O15457 936 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 RRP8O43159 456 aaKnown RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 TRAPPC3O43617 180 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 B4GALT2O60909 372 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 IGHV3-9P01782 118 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 CAPN1P07384 714 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 PRR23D2P0DMB1 279 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 BCKDHBP21953 392 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 DHPSP49366 369 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 RIPPLY3P57055 190 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 RND3P61587 244 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 RPL23AP62750 156 aaKnown RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 MS4A2Q01362 244 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 EWSR1Q01844 656 aaKnown RBP eCLIP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 TNFRSF17Q02223 184 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 PUDPQ08623 228 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 CRMP1Q14194 572 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 ABRAXAS2Q15018 415 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 TEX44Q53QW1 395 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 FAHD2BQ6P2I3 314 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 CYS1Q717R9 158 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 NANOGNBQ7Z5D8 188 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 MOB3BQ86TA1 216 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 ZNF329Q86UD4 541 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 NAXDQ8IW45 347 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 ABHD12Q8N2K0 398 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 DHRSXQ8N5I4 330 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 CNIH3Q8TBE1 160 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 FAHD2AQ96GK7 314 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 COQ2Q96H96 371 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 AMDHD1Q96NU7 426 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 RPRD1AQ96P16 312 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 SLC6A7Q99884 636 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 P2RY13Q9BPV8 354 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 TMEM121Q9BTD3 319 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 FN3KRPQ9HA64 309 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 TIGARQ9NQ88 270 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 UFSP2Q9NUQ7 469 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 PCSK1NQ9UHG2 260 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 LCMT1Q9UIC8 334 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 PTBP2Q9UKA9 531 aaKnown RBP4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 CDH9Q9ULB4 789 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 ALG6Q9Y672 507 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 CREBBPQ92793 2442 aa4.02□□□□□ -1.77
TRAPPC9-216ENST00000634178 FBN2P35556 2912 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 HELZP42694 1942 aaKnown RBP4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 A0A087WYN8 130 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 A0A0U1RQS6 177 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 A0A1B0GUA9 196 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 ZSCAN5BA6NJL1 495 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 EPM2AB3EWF7 344 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 UGT2B17O75795 530 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 ERLIN2O94905 339 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 SEMA4FO95754 770 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 CALM1P0DP23 149 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 CALM2P0DP24 149 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 CALM3P0DP25 149 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 HLA-EP13747 358 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 HPCAL1P37235 193 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 POU3F4P49335 361 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 UCNP55089 124 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 ERVK11-1P61568 191 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 PAX8Q06710 450 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 COX10Q12887 443 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 TRDNQ13061 729 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 PLD1Q13393 1074 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 IL18R1Q13478 541 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 RUNX3Q13761 415 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 MXD4Q14582 209 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 NDUFA9Q16795 377 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 C10orf120Q5SQS8 335 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 ACSM5Q6NUN0 579 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 CCDC80Q76M96 950 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 VSTM4Q8IW00 320 aa4.01□□□□□ -1.77
TRAPPC9-216ENST00000634178 SLC38A6Q8IZM9 456 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms