RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 MRPL48Q96GC5 212 aaKnown RBP17.89■□□□□ 0.45
CLIP3-206ENST00000593074 ALG12Q9BV10 488 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 PI4KAP42356 2102 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 C4orf47A7E2U8 309 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 FADS1O60427 444 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 PGCP20142 388 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 EVI2BP34910 448 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 THBS2P35442 1172 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 TAB1Q15750 504 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 CCDC58Q4VC31 144 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 ACSM3Q53FZ2 586 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 PWWP2BQ6NUJ5 590 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 CEP76Q8TAP6 659 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 UBL7Q96S82 380 aaPredicted RBP17.89■□□□□ 0.45
CLIP3-206ENST00000593074 SEMA4CQ9C0C4 833 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 NDEL1Q9GZM8 345 aa17.89■□□□□ 0.45
CLIP3-206ENST00000593074 RPRD1BQ9NQG5 326 aaKnown RBP17.89■□□□□ 0.45
CLIP3-206ENST00000593074 A0A0G2JK05 382 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 A0A1W2PRG6 482 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 PATE3B3GLJ2 98 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 MAGEB4O15481 346 aaPredicted RBP17.88■□□□□ 0.45
CLIP3-206ENST00000593074 SERPINI2O75830 405 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 TIAF1O95411 115 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 SERPINA3P01011 423 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 BGLAPP02818 100 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 APEX1P27695 318 aaKnown RBP17.88■□□□□ 0.45
CLIP3-206ENST00000593074 HOXD12P35452 270 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 RPS5P46782 204 aaKnown RBP17.88■□□□□ 0.45
CLIP3-206ENST00000593074 EIF2B2P49770 351 aaKnown RBP17.88■□□□□ 0.45
CLIP3-206ENST00000593074 GDI2P50395 445 aaKnown RBP17.88■□□□□ 0.45
CLIP3-206ENST00000593074 IDNKQ5T6J7 187 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 IFI44Q8TCB0 444 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 NEDD4LQ96PU5 975 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 DEPDC7Q96QD5 511 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 TTYH2Q9BSA4 534 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 SLC22A4Q9H015 551 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 SACM1LQ9NTJ5 587 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 ACOXLQ9NUZ1 547 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 GNG8Q9UK08 70 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 MOKQ9UQ07 419 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 SPEGQ15772 3267 aa17.88■□□□□ 0.45
CLIP3-206ENST00000593074 OR6C70A6NIJ9 312 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 F13BP05160 661 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 CXCR1P25024 350 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 ITPKBP27987 946 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 FOXL2P58012 376 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 RNF4P78317 190 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 CBFBQ13951 182 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 P2RY14Q15391 338 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 SFXN4Q6P4A7 337 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 RPL22L1Q6P5R6 122 aaKnown RBP17.87■□□□□ 0.45
CLIP3-206ENST00000593074 LYPD4Q6UWN0 246 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 PAMR1Q6UXH9 720 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 AKAP14Q86UN6 197 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 RPS4Y2Q8TD47 263 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 TP53INP1Q96A56 240 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 TRAV36DV7A0A075B6V5 113 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 TRAV1-2A0A0B4J238 106 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 ADAM10O14672 748 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 GMFGO60234 142 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 HEXBP07686 556 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 P2RX1P51575 399 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 TPTEP56180 551 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 DCDP81605 110 aaKnown RBP17.87■□□□□ 0.45
CLIP3-206ENST00000593074 DAB2P98082 770 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 SELENBP1Q13228 472 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 MESTQ5EB52 335 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 ANKRD37Q7Z713 158 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 Q8N402 240 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 APCDD1LQ8NCL9 501 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 OR13C5Q8NGS8 318 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 THAP4Q8WY91 577 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 TSPAN32Q96QS1 320 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 GRHPRQ9UBQ7 328 aa17.87■□□□□ 0.45
CLIP3-206ENST00000593074 CER1O95813 267 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 NUDT14O95848 222 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 SLC2A2P11168 524 aaPredicted RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 GP1BBP13224 206 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 CASP3P42574 277 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 OR10A3P58181 314 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 RPS11P62280 158 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 ZNF684Q5T5D7 378 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 AGAP6Q5VW22 663 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 GPR139Q6DWJ6 353 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 AGAP4Q96P64 663 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 C11orf54Q9H0W9 315 aaPredicted RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 B3GAT2Q9NPZ5 323 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 RXFP3Q9NSD7 469 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 WDR70Q9NW82 654 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 NPAP1Q9NZP6 1156 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 MALT1Q9UDY8 824 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 IGHV3-20A0A0C4DH32 117 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 IDSB3KWA1 339 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 KHNYNO15037 678 aaKnown RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 SCO2O43819 266 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 CPNE3O75131 537 aaKnown RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 HIST1H2ABP04908 130 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 ELK1P19419 428 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 MADCAM1Q13477 382 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 IL18Q14116 193 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms