RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 COX4I1P13073 169 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 HOXC12P31275 282 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 SELENOPP49908 381 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 SEC24CP53992 1094 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 ADAM8P78325 824 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 TGFBR3Q03167 851 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 TSPYL5Q86VY4 417 aaPredicted RBP23.93■■□□□ 1.42
SMAD4-213ENST00000591914 C17orf78Q8N4C9 275 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 ADAMTS16Q8TE57 1224 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 AKAP1Q92667 903 aaKnown RBP eCLIP23.93■■□□□ 1.42
SMAD4-213ENST00000591914 ELAC2Q9BQ52 826 aaKnown RBP23.93■■□□□ 1.42
SMAD4-213ENST00000591914 CORINQ9Y5Q5 1042 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 OR6C65A6NJZ3 312 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 CLOCKO15516 846 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 THY1P04216 161 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 ZNF43P17038 809 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 LTBQ06643 244 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 C9orf135Q5VTT2 229 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 ABHD12BQ7Z5M8 362 aaPredicted RBP23.92■■□□□ 1.42
SMAD4-213ENST00000591914 OR52N5Q8NH56 324 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 BOD1Q96IK1 185 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 TMUB1Q9BVT8 246 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 RCE1Q9Y256 329 aa23.92■■□□□ 1.42
SMAD4-213ENST00000591914 SMPD2O60906 423 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 PTNP21246 168 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 CBLP22681 906 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 NIPAL3Q6P499 406 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 WDR88Q6ZMY6 472 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 ARPINQ7Z6K5 226 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 TREML1Q86YW5 311 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 KRTAP1-3Q8IUG1 177 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 LRRC75A-AS1Q8N1F1 130 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 SCAIQ8N9R8 606 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 OR2T12Q8NG77 320 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 PROX1Q92786 737 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 MOGAT1Q96PD6 335 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 CMTM6Q9NX76 183 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 BAG5Q9UL15 447 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 AP3M1Q9Y2T2 418 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 CADP27708 2225 aa23.91■■□□□ 1.42
SMAD4-213ENST00000591914 TRAPPC13A5PLN9 417 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 ZNF432O94892 652 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 CLDN17P56750 224 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 LGALS3BPQ08380 585 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 C1QTNF12Q5T7M4 302 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 WDR31Q8NA23 367 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 ASPNQ9BXN1 380 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 LINC00470Q9BZP3 86 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 SLC17A5Q9NRA2 495 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 SLC7A7Q9UM01 511 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 SH3GLB1Q9Y371 365 aa23.9■■□□□ 1.42
SMAD4-213ENST00000591914 A0A1W2PR80 420 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 MS4A18H0YCH9 400 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 TRAF3IP2O43734 574 aaPredicted RBP23.89■■□□□ 1.41
SMAD4-213ENST00000591914 KRT33AO76009 404 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 IFNA14P01570 189 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 NKX6-1P78426 367 aaPredicted RBP23.89■■□□□ 1.41
SMAD4-213ENST00000591914 C1DQ13901 141 aaKnown RBP23.89■■□□□ 1.41
SMAD4-213ENST00000591914 MS4A18Q3C1V0 323 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 ZNF672Q499Z4 452 aaPredicted RBP23.89■■□□□ 1.41
SMAD4-213ENST00000591914 C8orf82Q6P1X6 216 aaPredicted RBP23.89■■□□□ 1.41
SMAD4-213ENST00000591914 LINGO2Q7L985 606 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 CARM1Q86X55 608 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 SLC15A3Q8IY34 581 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 MICU2Q8IYU8 434 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 WFDC11Q8NEX6 87 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 KBTBD8Q8NFY9 601 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 MPP4Q96JB8 637 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 ZNF426Q9BUY5 554 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 MYLK2Q9H1R3 596 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 MRPL39Q9NYK5 338 aaKnown RBP23.89■■□□□ 1.41
SMAD4-213ENST00000591914 AMDHD2Q9Y303 409 aa23.89■■□□□ 1.41
SMAD4-213ENST00000591914 ELOVL7A1L3X0 281 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 ZNF587BE7ETH6 402 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 UPK3AO75631 287 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 HPRP00739 348 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 MT-ATP6P00846 226 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 CD99P14209 185 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 NQO1P15559 274 aaKnown RBP23.88■■□□□ 1.41
SMAD4-213ENST00000591914 DRD4P21917 467 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 LSP1P33241 339 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 KDELR2P33947 212 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 FOXD4Q12950 439 aaPredicted RBP23.88■■□□□ 1.41
SMAD4-213ENST00000591914 TMEM108Q6UXF1 575 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 NEUROG1Q92886 237 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 FBXW5Q969U6 566 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 ALKBH3Q96Q83 286 aaPredicted RBP23.88■■□□□ 1.41
SMAD4-213ENST00000591914 EFCAB1Q9HAE3 211 aa23.88■■□□□ 1.41
SMAD4-213ENST00000591914 SHISA9B4DS77 424 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 LRRN3E7EW58 273 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 SNX3O60493 162 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 TMCC2O75069 709 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 TNFRSF1BP20333 461 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 ZNF83P51522 516 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 SLC25A3Q00325 362 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 CYBRD1Q53TN4 286 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 SHEQ5VZ18 495 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 KLHL17Q6TDP4 642 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 NHLRC1Q6VVB1 395 aa23.87■■□□□ 1.41
SMAD4-213ENST00000591914 HACD2Q6Y1H2 254 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms