RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 SNRPBP14678 240 aaKnown RBP9.35□□□□□ -0.91
RFFL-212ENST00000584655 ZNF12P17014 697 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 SLC6A6P31641 620 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 SERTAD2Q14140 314 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 SYT6Q5T7P8 510 aaPredicted RBP9.35□□□□□ -0.91
RFFL-212ENST00000584655 Q6ZNX1 250 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 RAB11FIP2Q7L804 512 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 CHMP1BQ7LBR1 199 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 PRSS45Q7RTY3 260 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 ZNF676Q8N7Q3 588 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 DEFB124Q8NES8 71 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 OR10AC1Q8NH08 325 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 GHSRQ92847 366 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 CDADC1Q9BWV3 514 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 INIPQ9NRY2 104 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 TXNL4BQ9NX01 149 aaKnown RBP9.35□□□□□ -0.91
RFFL-212ENST00000584655 CLDN16Q9Y5I7 305 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 GMEB1Q9Y692 573 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 DSCR3O14972 297 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 NDUFB2O95178 105 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 IFNGP01579 166 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 LIMS1P48059 325 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 HMGA2P52926 109 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 BLVRAP53004 296 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 ELAVL1Q15717 326 aaKnown RBP9.35□□□□□ -0.91
RFFL-212ENST00000584655 RASSF6Q6ZTQ3 369 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 RFKQ969G6 155 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 FAM46BQ96A09 425 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 PITX2Q99697 317 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 MCCC2Q9HCC0 563 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 COPS3Q9UNS2 423 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 SLC22A13Q9Y226 551 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 SHANK1Q9Y566 2161 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 NOTCH2Q04721 2471 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 RAMP1O60894 148 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 AHSA1O95433 338 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 TNFSF8P32971 234 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 HOXD12P35452 270 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 GNALP38405 381 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 AGFG1P52594 562 aaKnown RBP9.34□□□□□ -0.91
RFFL-212ENST00000584655 ACY1Q03154 408 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 LTBQ06643 244 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 FOXF1Q12946 379 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 SGCAQ16586 387 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 SPINK14Q6IE38 97 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 ZNF550Q7Z398 422 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 ANKRD13BQ86YJ7 626 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 KBTBD8Q8NFY9 601 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 TSEN15Q8WW01 171 aaKnown RBP9.34□□□□□ -0.91
RFFL-212ENST00000584655 DNASE2BQ8WZ79 361 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 NEDD4LQ96PU5 975 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 CITED4Q96RK1 184 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 CMKLR1Q99788 373 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 ELL3Q9HB65 397 aaPredicted RBP9.34□□□□□ -0.91
RFFL-212ENST00000584655 TMED7-TICAM2A0A0A6YYA0 188 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 SLC22A1O15245 554 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 IFNGR1P15260 489 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 SPNP16150 400 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 EVI2BP34910 448 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 TLE3Q04726 772 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 ZSWIM7Q19AV6 140 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 KLHL22Q53GT1 634 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 CELF2-AS1Q8N7Q2 184 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 ZNF721Q8TF20 911 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 KCTD7Q96MP8 289 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 KCNG2Q9UJ96 466 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 TMED7Q9Y3B3 224 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 A0A0B4J2E0 115 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 A0A1B0GX12 115 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 STK17BO94768 372 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 HMGN1P05114 100 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 GABRB1P18505 474 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 FPR3P25089 353 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 TSFMP43897 325 aaKnown RBP9.34□□□□□ -0.91
RFFL-212ENST00000584655 COX10Q12887 443 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 P2RY14Q15391 338 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 OR10K2Q6IF99 312 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 KIAA1958Q8N8K9 716 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 BARHL1Q9BZE3 327 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 EMC7Q9NPA0 242 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 MCUBQ9NWR8 336 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 LAMP5Q9UJQ1 280 aa9.34□□□□□ -0.91
RFFL-212ENST00000584655 NSG1A0A0A6YYJ2 146 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 DCDC2BA2VCK2 349 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 TNFRSF10AO00220 468 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 CHP2O43745 196 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 CCNKO75909 580 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 WDPCPO95876 746 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 MST1P26927 711 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 CD97P48960 835 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 GPLD1P80108 840 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 MLC1Q15049 377 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 TBCEQ15813 527 aaPredicted RBP9.34□□□□□ -0.92
RFFL-212ENST00000584655 UBE2UQ5VVX9 321 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 HEPHL1Q6MZM0 1159 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 FAAP20Q6NZ36 180 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 PARP16Q8N5Y8 322 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 OR5W2Q8NH69 310 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms