RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ZNF770Q6IQ21 691 aaPredicted RBP15.23■□□□□ 0.03
NUP88-210ENST00000574867 ZER1Q7Z7L7 766 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 OAFQ86UD1 273 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 CCDC103Q8IW40 242 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 SVOPLQ8N434 492 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 LRRC17Q8N6Y2 441 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 OR9Q2Q8NGE9 314 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 OR5K1Q8NHB7 308 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 FANCFQ9NPI8 374 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 MGAT4BQ9UQ53 548 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 HIF3AQ9Y2N7 669 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 LOC102725191A0A1B0GVB3 256 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 ZNF724A8MTY0 619 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 PLPP3O14495 311 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 GPR171O14626 319 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 TSPAN19P0C672 248 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 TMIGD3P0DMS9 266 aaPredicted RBP15.23■□□□□ 0.03
NUP88-210ENST00000574867 RPS4XP62701 263 aaKnown RBP15.23■□□□□ 0.03
NUP88-210ENST00000574867 SLC17A1Q14916 467 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 LAPTM4AQ15012 233 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 TAF11Q15544 211 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 EEF1A1P5Q5VTE0 462 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 HMBOX1Q6NT76 420 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 TMEM179BQ7Z7N9 219 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 AMIGO2Q86SJ2 522 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 GPAT4Q86UL3 456 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 MED12LQ86YW9 2145 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 HIPK1Q86Z02 1210 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 GNPDA2Q8TDQ7 276 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 CCDC120Q96HB5 630 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 PKP2Q99959 881 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 SFXN3Q9BWM7 321 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 NDEL1Q9GZM8 345 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 PDP1Q9P0J1 537 aaPredicted RBP15.23■□□□□ 0.03
NUP88-210ENST00000574867 EMC9Q9Y3B6 208 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 H0YHG0 523 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 CDC42EP2O14613 210 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 RAMP1O60894 148 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 ADAP00813 363 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 ADORA3P0DMS8 318 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 UQCRC1P31930 480 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 ZP4Q12836 540 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 TSPAN31Q12999 210 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 GUSBP1Q15486 140 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 FAM214BQ7L5A3 538 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 GCNT2Q8N0V5 402 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 AQP11Q8NBQ7 271 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 INTS12Q96CB8 462 aaKnown RBP15.22■□□□□ 0.03
NUP88-210ENST00000574867 OXGR1Q96P68 337 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 DGCR6LQ9BY27 220 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 ING1Q9UK53 422 aaPredicted RBP15.22■□□□□ 0.03
NUP88-210ENST00000574867 HIVEP3Q5T1R4 2406 aa15.22■□□□□ 0.03
NUP88-210ENST00000574867 A0A0G2JNJ9 132 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 YES1P07947 543 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 ZNF23P17027 643 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 GSTM3P21266 225 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 CTSSP25774 331 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 GSSP48637 474 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 IL1RL1Q01638 556 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 TMEM201Q5SNT2 666 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 MEX3DQ86XN8 651 aaKnown RBP15.21■□□□□ 0.03
NUP88-210ENST00000574867 ZDHHC13Q8IUH4 622 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 PQLC1Q8N2U9 271 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 NAXEQ8NCW5 288 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 OR9K2Q8NGE7 335 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 OR13C2Q8NGS9 318 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 SDCCAG3Q96C92 435 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 SEMA6AQ9H2E6 1030 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 B3GAT1Q9P2W7 334 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 Q9UFV3 132 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 NOX1Q9Y5S8 564 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 UNC119BA6NIH7 251 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 MS4A18H0YCH9 400 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 BLOC1S5-TXNDC5H3BN57 136 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 IL18BPO95998 194 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 ANXA8P13928 327 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 ZNF43P17038 809 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 AGTR1P30556 359 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 SMSP52788 366 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 PRPS1P60891 318 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 RPL18Q07020 188 aaKnown RBP15.21■□□□□ 0.03
NUP88-210ENST00000574867 MS4A18Q3C1V0 323 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 ZBED5Q49AG3 693 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 NCCRP1Q6ZVX7 275 aaPredicted RBP15.21■□□□□ 0.03
NUP88-210ENST00000574867 PXKQ7Z7A4 578 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 UEVLDQ8IX04 471 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 ANKK1Q8NFD2 765 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 TAS2R5Q9NYW4 299 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 COQ3Q9NZJ6 369 aa15.21■□□□□ 0.03
NUP88-210ENST00000574867 ZNF629Q9UEG4 869 aaPredicted RBP15.21■□□□□ 0.03
NUP88-210ENST00000574867 TRAV27A0A087WT01 109 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 G3V2T6 193 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 RNF13O43567 381 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 GASTP01350 101 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 AHCYP23526 432 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 OPRM1P35372 400 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 ADORA2A-AS1P86434 159 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 TUSC5Q8IXB3 177 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 OR6K3Q8NGY3 331 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 DNAJC9Q8WXX5 260 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms