RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 TMEM43Q9BTV4 400 aa27.02■■□□□ 1.92
CMTM4-204ENST00000563952 B3GALT5Q9Y2C3 310 aa27.02■■□□□ 1.92
CMTM4-204ENST00000563952 CHP2O43745 196 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 BGLAPP02818 100 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 NQO1P15559 274 aaKnown RBP27.01■■□□□ 1.91
CMTM4-204ENST00000563952 ZNF83P51522 516 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 NKX6-1P78426 367 aaPredicted RBP27.01■■□□□ 1.91
CMTM4-204ENST00000563952 MFSD13AQ14CX5 517 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 ADAM5Q6NVV9 412 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 ABHD12BQ7Z5M8 362 aaPredicted RBP27.01■■□□□ 1.91
CMTM4-204ENST00000563952 KBTBD8Q8NFY9 601 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 OR2T12Q8NG77 320 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 LILRB1Q8NHL6 650 aaPredicted RBP27.01■■□□□ 1.91
CMTM4-204ENST00000563952 ADAMTS16Q8TE57 1224 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 NEUROG1Q92886 237 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 ASPNQ9BXN1 380 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 B3GAT1Q9P2W7 334 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 SH3GLB1Q9Y371 365 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 SLC25A15Q9Y619 301 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 ROS1P08922 2347 aa27.01■■□□□ 1.91
CMTM4-204ENST00000563952 CD99P14209 185 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 LTBQ06643 244 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 ZNF611Q8N823 705 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 C1orf162Q8NEQ5 155 aaPredicted RBP27■■□□□ 1.91
CMTM4-204ENST00000563952 OR6S1Q8NH40 331 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 MOGAT1Q96PD6 335 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 ALKBH3Q96Q83 286 aaPredicted RBP27■■□□□ 1.91
CMTM4-204ENST00000563952 C1QTNF6Q9BXI9 259 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 AMBRA1Q9C0C7 1298 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 BAG5Q9UL15 447 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 SLC7A7Q9UM01 511 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 CORINQ9Y5Q5 1042 aa27■■□□□ 1.91
CMTM4-204ENST00000563952 TRAPPC13A5PLN9 417 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 ZNF587BE7ETH6 402 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 LRRN3E7EW58 273 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 IFNA14P01570 189 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 THY1P04216 161 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 TNFRSF1BP20333 461 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 HOXC12P31275 282 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 LRRC23Q53EV4 343 aaPredicted RBP26.99■■□□□ 1.91
CMTM4-204ENST00000563952 LINC00114Q6XXX2 140 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 WDR88Q6ZMY6 472 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 TSPYL5Q86VY4 417 aaPredicted RBP26.99■■□□□ 1.91
CMTM4-204ENST00000563952 CARM1Q86X55 608 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 TREML1Q86YW5 311 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 WFDC11Q8NEX6 87 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 SLC17A5Q9NRA2 495 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 CMTM6Q9NX76 183 aa26.99■■□□□ 1.91
CMTM4-204ENST00000563952 UPK3AO75631 287 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 FOXD4Q12950 439 aaPredicted RBP26.98■■□□□ 1.91
CMTM4-204ENST00000563952 PMS2P3Q13401 168 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 KLHL17Q6TDP4 642 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 ARPINQ7Z6K5 226 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 MICU2Q8IYU8 434 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 C17orf78Q8N4C9 275 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 WDR31Q8NA23 367 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 ADPRHL1Q8NDY3 354 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 TMEM171Q8WVE6 324 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 FBXW5Q969U6 566 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 PERPQ96FX8 193 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 TMUB1Q9BVT8 246 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 NSRP1Q9H0G5 558 aaKnown RBP26.98■■□□□ 1.91
CMTM4-204ENST00000563952 RCE1Q9Y256 329 aa26.98■■□□□ 1.91
CMTM4-204ENST00000563952 ELOVL7A1L3X0 281 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 OR6C65A6NJZ3 312 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 M0R1B8 84 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 ABCD4O14678 606 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 LYPD3O95274 346 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 HPRP00739 348 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 ZNF672Q499Z4 452 aaPredicted RBP26.97■■□□□ 1.91
CMTM4-204ENST00000563952 CYBRD1Q53TN4 286 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 TTC33Q6PID6 262 aaPredicted RBP26.97■■□□□ 1.91
CMTM4-204ENST00000563952 TMEM108Q6UXF1 575 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 DEF8Q6ZN54 512 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 UEVLDQ8IX04 471 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 SCAIQ8N9R8 606 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 SLC41A3Q96GZ6 507 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 PCDHAC1Q9H158 963 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 GMPR2Q9P2T1 348 aaKnown RBP26.97■■□□□ 1.91
CMTM4-204ENST00000563952 AMDHD2Q9Y303 409 aa26.97■■□□□ 1.91
CMTM4-204ENST00000563952 MS4A18H0YCH9 400 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 KPNA4O00629 521 aaPredicted RBP26.96■■□□□ 1.91
CMTM4-204ENST00000563952 SHOX2O60902 331 aaPredicted RBP26.96■■□□□ 1.91
CMTM4-204ENST00000563952 LSP1P33241 339 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 GYS2P54840 703 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 SLC25A3Q00325 362 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 MS4A18Q3C1V0 323 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 HIKESHIQ53FT3 197 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 KLHL24Q6TFL4 600 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 LINGO2Q7L985 606 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 CPLX4Q7Z7G2 160 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 SLC15A3Q8IY34 581 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 LRRC75A-AS1Q8N1F1 130 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 EFCAB1Q9HAE3 211 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 MRPL39Q9NYK5 338 aaKnown RBP26.96■■□□□ 1.91
CMTM4-204ENST00000563952 LAMP3Q9UQV4 416 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 AP3M1Q9Y2T2 418 aa26.96■■□□□ 1.91
CMTM4-204ENST00000563952 MAP1AP78559 2803 aaPredicted RBP26.96■■□□□ 1.91
CMTM4-204ENST00000563952 ARHGEF9O43307 516 aa26.95■■□□□ 1.9
CMTM4-204ENST00000563952 TRAF3IP2O43734 574 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms