RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CDS1Q92903 461 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 MUL1Q969V5 352 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ISOC1Q96CN7 298 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 UCN2Q96RP3 112 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FNDC11Q9BVV2 318 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 SFXN3Q9BWM7 321 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ANKRD19PQ9H560 264 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 MTHFD2LQ9H903 347 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FBXO34Q9NWN3 711 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-214ENST00000554604 SLC13A4Q9UKG4 626 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ITGB1BP2Q9UKP3 347 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 VDAC3Q9Y277 283 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF337Q9Y3M9 751 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 CELSR1Q9NYQ6 3014 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 SLC22A20A6NK97 555 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 ZAR1LA6NP61 321 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 XPNPEP2O43895 674 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 MPZL2O60487 215 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 FAM20BO75063 409 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 THBS1P07996 1170 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 GUSBP08236 651 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 OSMP13725 252 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 PCMT1P22061 227 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 FUT4P22083 530 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF41P51814 821 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 UGT2B15P54855 530 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 MVKQ03426 396 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SEC23BQ15437 767 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 NPTX1Q15818 432 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 FLYWCH1Q4VC44 716 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 EEF1A1P5Q5VTE0 462 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 OR2A2Q6IF42 318 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 TYW3Q6IPR3 259 aaKnown RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 CD300LDQ6UXZ3 194 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 ZAR1Q86SH2 424 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 MISPQ8IVT2 679 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 OR52P1PQ8NH57 321 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 RHOXF1Q8NHV9 184 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 FAM81AQ8TBF8 368 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SGCDQ92629 289 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 GTPBP3Q969Y2 492 aaKnown RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SH3YL1Q96HL8 342 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SIGLEC11Q96RL6 698 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SDF2Q99470 211 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 WFDC6Q9BQY6 131 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 SAP130Q9H0E3 1048 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 CACYBPQ9HB71 228 aaKnown RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 KLHL28Q9NXS3 571 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 CRIM1Q9NZV1 1036 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 REV1Q9UBZ9 1251 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 WDR45Q9Y484 360 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 HRNRQ86YZ3 2850 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-214ENST00000554604 MED13LQ71F56 2210 aa11.16□□□□□ -0.62
SHMT2-214ENST00000554604 A0A087WZY1 265 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 TUBAL3A6NHL2 446 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 TRIM64BA6NI03 449 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PTGES3LE9PB15 166 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 HCRTR2O43614 444 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 RGS10O43665 173 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 OR10H3O60404 316 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 TRMUO75648 421 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 NUDT14O95848 222 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 TGM6O95932 706 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 GABRB1P18505 474 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 RPS4Y1P22090 263 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 IFNA8P32881 189 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 SUCLG1P53597 346 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 TMBIM6P55061 237 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 CLDN20P56880 219 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 CDC42P60953 191 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 RPS3AP61247 264 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 ROR2Q01974 943 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 COX10Q12887 443 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PIN1Q13526 163 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 LARS2Q15031 903 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 SGCBQ16585 318 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 DCST2Q5T1A1 773 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PGBD2Q6P3X8 592 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PODNL1Q6PEZ8 512 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 LUZP2Q86TE4 346 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 VRK2Q86Y07 508 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 P3H2Q8IVL5 708 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PEX5LQ8IYB4 626 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF619Q8N2I2 560 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 CNEP1R1Q8N9A8 125 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 PHOSPHO1Q8TCT1 267 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 SLC7A13Q8TCU3 470 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 FAM222BQ8WU58 562 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 C12orf43Q96C57 262 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 MPP4Q96JB8 637 aa11.15□□□□□ -0.62
SHMT2-214ENST00000554604 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF350Q9GZX5 532 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms