RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 TRIM3O75382 744 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NEURL1O76050 574 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OR6A2O95222 327 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 AHSA1O95433 338 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MT-ATP6P00846 226 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 HMGN1P05114 100 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SAGP10523 405 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TFPIP10646 304 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 PEPDP12955 493 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 POU2F1P14859 743 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CBLP22681 906 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 FPR3P25089 353 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 HTR2AP28223 471 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ELK4P28324 431 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 GTF2E2P29084 291 aaKnown RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OMPP47874 163 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 GSSP48637 474 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SMSP52788 366 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 AQP4P55087 323 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CRYZQ08257 329 aaKnown RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SELENBP1Q13228 472 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TOP3AQ13472 1001 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 KEAP1Q14145 624 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SLC10A1Q14973 349 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TOMM20Q15388 145 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ZIK1Q3SY52 487 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SLC36A3Q495N2 470 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CMPK2Q5EBM0 449 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF766Q5HY98 468 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NHSL2Q5HYW2 709 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 FAM69AQ5T7M9 428 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ATP1A1-AS1Q5TC04 95 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OR5M10Q6IEU7 315 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 C3orf33Q6P1S2 294 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 PGBD2Q6P3X8 592 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CASP12Q6UXS9 341 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MDGA2Q7Z553 956 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ZER1Q7Z7L7 766 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OAFQ86UD1 273 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 COMTD1Q86VU5 262 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SLC22A16Q86VW1 577 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 EPHX4Q8IUS5 362 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NRMQ8IXM6 262 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 C8orf59Q8N0T1 100 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 C10orf53Q8N6V4 93 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CLDN22Q8N7P3 220 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 WDSUB1Q8N9V3 476 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 FDCSPQ8NFU4 85 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OR2M7Q8NG81 312 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OR9Q2Q8NGE9 314 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 OR52L1Q8NGH7 329 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MFSD8Q8NHS3 518 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TEX47Q8TBZ9 253 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM255BQ8WV15 326 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TRUB1Q8WWH5 349 aaKnown RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 LIPHQ8WWY8 451 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TFAP2CQ92754 450 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 FBXW5Q969U6 566 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NTNG2Q96CW9 530 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 BPIFA2Q96DR5 249 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 C1GALT1C1Q96EU7 318 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 Q96MT0 163 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SLC38A2Q96QD8 506 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NR1H4Q96RI1 486 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 PRSS27Q9BQR3 290 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NAA11Q9BSU3 229 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 FUZQ9BT04 418 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF426Q9BUY5 554 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ADI1Q9BV57 179 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TOR3AQ9H497 397 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 GALNT9Q9HCQ5 603 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TIGARQ9NQ88 270 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 NANSQ9NR45 359 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MAN2C1Q9NTJ4 1040 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MED17Q9NVC6 651 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CHCHD3Q9NX63 227 aaKnown RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 PAQR5Q9NXK6 330 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 ANKRD10Q9NXR5 420 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 VNN3Q9NY84 501 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 IL20Q9NYY1 176 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 PLA2G3Q9NZ20 509 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 H2AFY2Q9P0M6 372 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CHRNA9Q9UGM1 479 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 VDAC3Q9Y277 283 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TRAPPC4Q9Y296 219 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 C15orf41Q9Y2V0 281 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TMED7Q9Y3B3 224 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 HDGFL3Q9Y3E1 203 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MAGED1Q9Y5V3 778 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 AP4B1Q9Y6B7 739 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 URB1O60287 2271 aaKnown RBP4.52□□□□□ -1.69
VTI1B-202ENST00000553619 CPAMD8Q8IZJ3 1885 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 FREM3P0C091 2139 aa4.51□□□□□ -1.69
VTI1B-202ENST00000553619 MPDZO75970 2070 aa4.51□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM72A0PK05 275 aa4.51□□□□□ -1.69
VTI1B-202ENST00000553619 BCKDKO14874 412 aa4.51□□□□□ -1.69
VTI1B-202ENST00000553619 SEC14L5O43304 696 aa4.51□□□□□ -1.69
VTI1B-202ENST00000553619 GMFGO60234 142 aa4.51□□□□□ -1.69
VTI1B-202ENST00000553619 NME2P1O60361 137 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms