RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KCNK6Q9Y257 313 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF264O43296 627 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 RCBTB2O95199 551 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 SERPIND1P05546 499 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PEPDP12955 493 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PGCP20142 388 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 AK4P27144 223 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 MAT2AP31153 395 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 NR4A2P43354 598 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ARHGDIBP52566 201 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CLDN18P56856 261 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 OR1D5P58170 312 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 YBX1P67809 324 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CBX1P83916 185 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 VLDLRP98155 873 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 MYBPC1Q00872 1141 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 IL1RL1Q01638 556 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 TFF2Q03403 129 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CDC20Q12834 499 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 DNASE1L3Q13609 305 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ZBED5Q49AG3 693 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PDLIM3Q53GG5 364 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 C1orf100Q5SVJ3 147 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM198Q66K66 360 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ARMC6Q6NXE6 501 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 TIPARPQ7Z3E1 657 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 Q8N1Y9 231 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 Q8NA96 180 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CPT1CQ8TCG5 803 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 Q8TCH9 128 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PIGKQ92643 395 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CDRT15Q96T59 188 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CHID1Q9BWS9 393 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 COQ10BQ9H8M1 238 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 SP140LQ9H930 580 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PAPOLBQ9NRJ5 636 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 NKX1-2Q9UD57 310 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CAMK2AQ9UQM7 478 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 FARSAQ9Y285 508 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 KLF13Q9Y2Y9 288 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 TRBV23OR9-2A0A075B6M9 112 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 TRDV1A0A1B0GX56 115 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ERI3O43414 337 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 UTS2O95399 124 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 IFNW1P05000 195 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 HMGN2P05204 90 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CD1EP15812 388 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 GDF5P43026 501 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF84P51523 738 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CRISP1P54107 249 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PER3P56645 1201 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 OLR1P78380 273 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 MRPS34P82930 218 aaKnown RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 FLOT2Q14254 428 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF674Q2M3X9 581 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF880Q6PDB4 577 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 NPEPL1Q8NDH3 523 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PIGXQ8TBF5 258 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CFHR4Q92496 578 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF845Q96IR2 970 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 EGFL8Q99944 293 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 SH3GL3Q99963 347 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 GHRLQ9UBU3 117 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 MALT1Q9UDY8 824 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ST6GALNAC2Q9UJ37 374 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ERVK-19Q9WJR5 959 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ANKRD12Q6UB98 2062 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF354AO60765 605 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ITGA10O75578 1167 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 CCNB2O95067 398 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF205O95201 554 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 H1F0P07305 194 aaKnown RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 FTH1P19P0C7X4 201 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PGA4P0DJD7 388 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PGA3P0DJD8 388 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 FCGR2AP12318 317 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PSMB5P28074 263 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SSR2P43308 183 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SLC6A9P48067 706 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 NUDT2P50583 147 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 RAD23AP54725 363 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 RAC3P60763 192 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF155Q12901 538 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DAZAP2Q15038 168 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PGGHGQ32M88 737 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 FAM76BQ5HYJ3 339 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 C18orf63Q68DL7 685 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 NIPAL3Q6P499 406 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DOK6Q6PKX4 331 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM179BQ7Z7N9 219 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 WFDC8Q8IUA0 241 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PHC2Q8IXK0 858 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 OR52P1PQ8NH57 321 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 GIPC3Q8TF64 312 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 NSMAFQ92636 917 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 MCHR2Q969V1 340 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF570Q96NI8 536 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 OXGR1Q96P68 337 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms