RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TSSK4Q6SA08 328 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 Q7L0L9 218 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TPRA1Q86W33 373 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 CMIPQ8IY22 773 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 FAM160A2Q8N612 972 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR5AR1Q8NGP9 310 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR51A7Q8NH64 312 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 RAB7BQ96AH8 199 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 CCNL2Q96S94 520 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR51I1Q9H343 314 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 DDX31Q9H8H2 851 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 MARK1Q9P0L2 795 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 MGAT4CQ9UBM8 478 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 VPS13AQ96RL7 3174 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 A0A087WUU8 490 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TMEM202A6NGA9 273 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 A8MXK9 166 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 PRKRAO75569 313 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 RP2O75695 350 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SNAPC5O75971 98 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 WNT1P04628 370 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 NMBP08949 121 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 FPR3P25089 353 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TRIM23P36406 574 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 HSD17B2P37059 387 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 MAZP56270 477 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 DHODHQ02127 395 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 DYRK1AQ13627 763 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SWI5Q1ZZU3 235 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 MPP7Q5T2T1 576 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 METTL11BQ5VVY1 283 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR5M10Q6IEU7 315 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 ARL9Q6T311 187 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 BAIAP2L2Q6UXY1 529 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 ESPNLQ6ZVH7 1005 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 CXXC5Q7LFL8 322 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 PEG10Q86TG7 708 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 CDH26Q8IXH8 852 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR4K14Q8NGD5 310 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR51G2Q8NGK0 314 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR6T1Q8NGN1 323 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SCARB1Q8WTV0 552 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZDHHC1Q8WTX9 485 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 MNTQ99583 582 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 LPAR4Q99677 370 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SPOCK3Q9BQ16 436 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TREX2Q9BQ50 279 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZNF649Q9BS31 505 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SEMA4CQ9C0C4 833 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 QRSL1Q9H0R6 528 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 MKKSQ9NPJ1 570 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 TRIM36Q9NQ86 728 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 CNIH4Q9P003 139 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SHISA7A6NL88 538 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 STMND1H3BQB6 276 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SURF4O15260 269 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 TXNL1O43396 289 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 AHSA1O95433 338 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 TGM6O95932 706 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 UCHL1P09936 223 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 HOXB1P14653 301 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 HOXA1P49639 335 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 PDX1P52945 283 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 UBE2MP61081 183 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 FLI1Q01543 452 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 TNFRSF17Q02223 184 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 TRAM1Q15629 374 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PGGHGQ32M88 737 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ARSJQ5FYB0 599 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 RAET1LQ5VY80 246 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ZNF613Q6PF04 617 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PARM1Q6UWI2 310 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 C5orf46Q6UWT4 87 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 COMTD1Q86VU5 262 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PLXDC1Q8IUK5 500 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CPXM2Q8N436 756 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ZSCAN1Q8NBB4 408 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 BVESQ8NE79 360 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 BBS1Q8NFJ9 593 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 BBS10Q8TAM1 723 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 C3orf49Q96BT1 292 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 FAM46AQ96IP4 442 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 RBM14Q96PK6 669 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 ALG8Q9BVK2 526 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PTGES2Q9H7Z7 377 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ISG20L2Q9H9L3 353 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 MED17Q9NVC6 651 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 BABAM2Q9NXR7 383 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PPIL1Q9Y3C6 166 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 MUC6Q6W4X9 2439 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 A0A0A6YYC8 382 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 A0A1B0GVT2 93 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 I3L1I5 382 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 AIPO00170 330 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SOCS6O14544 535 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ST8SIA5O15466 376 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 APOC1P02654 83 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 FGF2P09038 288 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 GIPP09681 153 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 NDUFB7P17568 137 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms