RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RNF2Q99496 336 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 TEAD3Q99594 435 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CRNKL1Q9BZJ0 848 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 NT5DC2Q9H857 520 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF702PQ9H963 129 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SGK2Q9HBY8 427 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 EML4Q9HC35 981 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SH2D2AQ9NP31 389 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 TXLNGQ9NUQ3 528 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 NUDT4Q9NZJ9 180 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SPRR3Q9UBC9 169 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SEC14L4Q9UDX3 406 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SLC2A6Q9UGQ3 507 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SHPKQ9UHJ6 478 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CFAP45Q9UL16 551 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ASF1AQ9Y294 204 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 OARD1Q9Y530 152 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 GMEB1Q9Y692 573 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 STYXL1Q9Y6J8 313 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CACNA1FO60840 1977 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SYNJ1O43426 1573 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CPS1P31327 1500 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 KDM5AP29375 1690 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GAKO14976 1311 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 MYH3P11055 1940 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PIKFYVEQ9Y2I7 2098 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TRAV25A0A0B4J276 109 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 A0A1B0GTH9 108 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 KBTBD11-OT1A0A1B0GTJ5 212 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TEX48A0A1B0GUV7 120 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 FAM74A7A6NL05 159 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SHISA9B4DS77 424 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 G3V4G9 280 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ARPC3O15145 178 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 POLR1CO15160 346 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 B4GALT2O60909 372 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF253O75346 499 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GNA14O95837 355 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TGM6O95932 706 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SERPINE2P07093 398 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ANXA4P09525 319 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GIG44P09565 113 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF43P17038 809 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ATP6V1C1P21283 382 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF10P21506 573 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CALB2P22676 271 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PRKACBP22694 351 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 MMP11P24347 488 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ATP5A1P25705 553 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 P2RY2P41231 377 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GSSP48637 474 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PRRX1P54821 245 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DLX1P56177 255 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ACTR3P61158 418 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PAX8Q06710 450 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PJVKQ0ZLH3 352 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 BST2Q10589 180 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PEX6Q13608 980 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CYLC2Q14093 348 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 EMC2Q15006 297 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 IGFBP7Q16270 282 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC36Q1X8D7 754 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 FAM74A3Q4VXF1 159 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 KLHL22Q53GT1 634 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TTC23Q5W5X9 447 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC66Q68CR7 880 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TTC23LQ6PF05 361 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ABHD13Q7L211 337 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SLC39A11Q8N1S5 342 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 METTL4Q8N3J2 472 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PDCL2Q8N4E4 241 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 OR8A1Q8NGG7 326 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 OR5D13Q8NGL4 314 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 OR6X1Q8NH79 312 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 OR1F12Q8NHA8 337 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TBCKQ8TEA7 893 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GTSF1Q8WW33 167 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 NRGNQ92686 78 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 HGDQ93099 445 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SLC38A4Q969I6 547 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PLEKHF1Q96S99 279 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC77Q9BR77 488 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SRXN1Q9BYN0 137 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ELOVL3Q9HB03 270 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PLGRKTQ9HBL7 147 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SDHAF3Q9NRP4 125 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DUS2Q9NX74 493 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CLN8Q9UBY8 286 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 IKZF2Q9UKS7 526 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PPP1R3CQ9UQK1 317 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 AP3M1Q9Y2T2 418 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 FLVCR1Q9Y5Y0 555 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 NCOA1Q15788 1441 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ADGRL3Q9HAR2 1447 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM131Q92545 1883 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SRCAPQ6ZRS2 3230 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 POLR3AO14802 1390 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PBRM1Q86U86 1689 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CICQ96RK0 1608 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TSPOAP1O95153 1857 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms