RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 IL2RGP31785 369 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ARL3P36405 182 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 FAPQ12884 760 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 PRTGQ2VWP7 1150 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 C9orf152Q5JTZ5 239 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 Q6ZPB1 254 aaPredicted RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 PXKQ7Z7A4 578 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 KMT5CQ86Y97 462 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ADGRG5Q8IZF4 528 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 GLYATL2Q8WU03 294 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 POTEKPQ9BYX7 375 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 METTL9Q9H1A3 318 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 FKBP14Q9NWM8 211 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CLEC1BQ9P126 229 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 DOCK5Q9H7D0 1870 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 A0A096LPE4 126 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 IGHV3-64DA0A0J9YX35 117 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PPZ6 126 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 PRAMEF27A3QJZ7 478 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 APOBEC1P41238 236 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 EMP3P54852 163 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 EDDM3BP56851 147 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TSPAN31Q12999 210 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SIMC1Q8NDZ2 872 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 OR7G2Q8NG99 324 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MIB2Q96AX9 1013 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SARAFQ96BY9 339 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SYT3Q9BQG1 590 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 LHPPQ9H008 270 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MMP27Q9H306 513 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CCDC86Q9H6F5 360 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 HAO2Q9NYQ3 351 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 GMPR2Q9P2T1 348 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 NDRG3Q9UGV2 375 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 A0A1B0GV50 99 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 P2RY10O00398 339 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TSPAN4O14817 238 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ZNF780AO75290 641 aaPredicted RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 BMP2P12643 396 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CD34P28906 385 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 KIR2DL3P43628 341 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TMBIM6P55061 237 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ARF1P84077 181 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 RPL19P84098 196 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 MAB21L1Q13394 359 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 GK3PQ14409 553 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CCDC58Q4VC31 144 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SLX4IPQ5VYV7 408 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 LAIR1Q6GTX8 287 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 GRINAQ7Z429 371 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 BEST3Q8N1M1 668 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 LILRB2Q8N423 598 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SMRP1Q8NCR6 262 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 OR5D18Q8NGL1 313 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SLC35A4Q96G79 324 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 DCLRE1CQ96SD1 692 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 TUBA1CQ9BQE3 449 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 FUNDC2Q9BWH2 189 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SEMA4GQ9NTN9 838 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MGAT4CQ9UBM8 478 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 EBF1Q9UH73 591 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 A6NIN4 97 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 FIGNL2A6NMB9 653 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 GOSR2O14653 212 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TOR1AO14656 332 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 NCR1O76036 304 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 KCNK2O95069 426 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 NXPH2O95156 264 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 S100A6P06703 90 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PRKAR1BP31321 381 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 AGFG1P52594 562 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 RPS18P62269 152 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 AIMP2Q13155 320 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 OR1C1Q15619 314 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PRAMEF9Q5VWM5 478 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PLAG1Q6DJT9 500 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CGB2Q6NT52 195 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TCTN3Q6NUS6 607 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 H1FNTQ75WM6 255 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 OR1S1Q8NH92 325 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 NDNFQ8TB73 568 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 SORCS2Q96PQ0 1159 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 FBXO4Q9UKT5 387 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 NTNG1Q9Y2I2 539 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 LSM5Q9Y4Y9 91 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 SMCHD1A6NHR9 2005 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 SCN4AP35499 1836 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TAF1LQ8IZX4 1826 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 LRRC30A6NM36 301 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 INMT-MINDY4F8WBC2 141 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 GPR171O14626 319 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TMPRSS11DO60235 418 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 GNAO1P09471 354 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 FOLR1P15328 257 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CLDN15P56746 228 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ZXDAP98168 799 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MFAP5Q13361 173 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PROX2Q3B8N5 592 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 GSG1LQ6UXU4 331 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms