RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TRDV1A0A1B0GX56 115 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 PRAMEF27A3QJZ7 478 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 SLC33A1O00400 549 aaPredicted RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 PGCP20142 388 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 LIPNQ5VXI9 398 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 SLC25A24Q6NUK1 477 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 NIPAL3Q6P499 406 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 ASB12Q8WXK4 309 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 SEC22AQ96IW7 307 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 METTL8Q9H825 291 aaKnown RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 REV1Q9UBZ9 1251 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 CGGBP1Q9UFW8 167 aaPredicted RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 C19orf53Q9UNZ5 99 aaPredicted RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 KIR2DS5A0A0G2JLQ3 304 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 A0A0G2JNG1 304 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 A0A1W2PPV9 198 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 F5H5K5 113 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 KIR2DS3K7RE56 304 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 ZNF264O43296 627 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 APOC3P02656 99 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 RIDAP52758 137 aaKnown RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 KIR2DS5Q14953 304 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 SGCBQ16585 318 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 HBMQ6B0K9 141 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 COMTD1Q86VU5 262 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 SLC25A44Q96H78 314 aaPredicted RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 INTS14Q96SY0 518 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 UBQLN4Q9NRR5 601 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 PPP4R1LQ9P1A2 415 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
SCN3B-206ENST00000530277 SLC22A7Q9Y694 548 aa11.37□□□□□ -0.59
SCN3B-206ENST00000530277 IGKV1-8A0A0C4DH67 115 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 A0A1B0GVI7 797 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 TMEM129A0AVI4 362 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 GOSR2O14653 212 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 CPEP16870 476 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 PSMA3P25788 255 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 MAPK3P27361 379 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 MEP1BQ16820 701 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 RAET1LQ5VY80 246 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 ZNF615Q8N8J6 731 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 TP53I13Q8NBR0 393 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 OR7G1Q8NGA0 311 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 HYLS1Q96M11 299 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 ARHGAP9Q9BRR9 750 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 PITHD1Q9GZP4 211 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 B3GAT2Q9NPZ5 323 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 CUTCQ9NTM9 273 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 MED11Q9P086 117 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 ZNF593O00488 134 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 DUX1O43812 170 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 NPR2P20594 1047 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 FRKP42685 505 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 MAMDC2Q7Z304 686 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 CCDC190Q86UF4 302 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 CREB3L1Q96BA8 519 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 OR5B2Q96R09 309 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 RANBP2P49792 3224 aaKnown RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 C4orf51C9J302 202 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 IMPA2O14732 288 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 TCRBP04435 133 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 PRKACAP17612 351 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 RAB38P57729 211 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 CLRN1P58418 232 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 RRAS2P62070 204 aaPredicted RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 NXF5Q9H1B4 397 aaKnown RBP11.36□□□□□ -0.59
SCN3B-206ENST00000530277 NOX3Q9HBY0 568 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 BAIAP2Q9UQB8 552 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 NEUROG3Q9Y4Z2 214 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 ANKRD36A6QL64 1941 aa11.36□□□□□ -0.59
SCN3B-206ENST00000530277 FITM1A5D6W6 292 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 METTL21EPA6NDL7 271 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 GALR3O60755 368 aaPredicted RBP11.35□□□□□ -0.59
SCN3B-206ENST00000530277 KCNJ13O60928 360 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 GLT8D1Q68CQ7 371 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 C12orf73Q69YU5 71 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 TSEN54Q7Z6J9 526 aaKnown RBP11.35□□□□□ -0.59
SCN3B-206ENST00000530277 SHISA5Q8N114 240 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 TMEM52Q8NDY8 209 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 GPR148Q8TDV2 347 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 C8orf44Q96CB5 159 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 SERINC1Q9NRX5 453 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 SCN5AQ14524 2016 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 OR5K3A6NET4 321 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 SPINT1O43278 529 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 MPIG6BO95866 241 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 TP53P04637 393 aaPredicted RBP11.35□□□□□ -0.59
SCN3B-206ENST00000530277 SFTPBP07988 381 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 ANXA7P20073 488 aaKnown RBP11.35□□□□□ -0.59
SCN3B-206ENST00000530277 CD1CP29017 333 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 HTRA4P83105 476 aaPredicted RBP11.35□□□□□ -0.59
SCN3B-206ENST00000530277 POU4F2Q12837 409 aa11.35□□□□□ -0.59
SCN3B-206ENST00000530277 FXNQ16595 210 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms