RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 HDGFL3Q9Y3E1 203 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 DTNAQ9Y4J8 743 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TET2Q6N021 2002 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 NPIPB8E9PQR5 432 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 EIF4E2O60573 245 aaKnown RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 URI1O94763 535 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 UBOX5O94941 541 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 OR4F21O95013 312 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 CRYBA1P05813 215 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 RPS17P08708 135 aaKnown RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 HSD3B1P14060 373 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 HSD3B2P26439 372 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 CRABP2P29373 138 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 NTSP30990 170 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 FNTAP49354 379 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 SELENOPP49908 381 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 P2RY4P51582 365 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 CCR4P51679 360 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 ATP12AP54707 1039 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 POU6F2P78424 691 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 ARF1P84077 181 aaKnown RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 PAX2Q02962 417 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 ACSM2AQ08AH3 577 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 NPRL3Q12980 569 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 ACSM2BQ68CK6 577 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 PAQR6Q6TCH4 344 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 Q6YL49 198 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 TSPYL5Q86VY4 417 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 PARP8Q8N3A8 854 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 OR9K2Q8NGE7 335 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 OR52E2Q8NGJ4 325 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF483Q8TF39 744 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 PPP1R14AQ96A00 147 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZHX1-C8orf76Q96EF9 292 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 EGLN2Q96KS0 407 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 DHRS1Q96LJ7 313 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 MS4A4EQ96PG1 132 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 VPS11Q9H270 941 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 B3GNT2Q9NY97 397 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 TMEM181Q9P2C4 612 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 CHRNA9Q9UGM1 479 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
TRAPPC9-212ENST00000521944 IGHV1-69-2A0A0G2JMI3 117 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 CCDC189A1A4V9 331 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZC3H12DA2A288 527 aaKnown RBP7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 C17orf100A8MU93 164 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF587BE7ETH6 402 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 STX16-NPEPL1H3BU86 382 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 STX16O14662 325 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 FOXH1O75593 365 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 KLHL2O95198 593 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 MPIG6BO95866 241 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 CLPTM1O96005 669 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 IGHMP01871 453 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ALOX5P09917 674 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 SPRP35270 261 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ARR3P36575 388 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 APOBEC1P41238 236 aaKnown RBP7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ARL4CP56559 192 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 BTKQ06187 659 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF763Q0D2J5 394 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 PDCD1Q15116 288 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 FAM83EQ2M2I3 478 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF385BQ569K4 471 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 SPIN4Q56A73 249 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 PDZK1Q5T2W1 519 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ANKRD26P1Q6NSI1 321 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 USP51Q70EK9 711 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 CYS1Q717R9 158 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 CREG2Q8IUH2 290 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 GSPT2Q8IYD1 628 aaKnown RBP7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZBED8Q8IZ13 594 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 TMCO5AQ8N6Q1 288 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 TMEM99Q8N816 258 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 IL17RDQ8NFM7 739 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 CDC26Q8NHZ8 85 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 TRIM44Q96DX7 344 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 GAL3ST1Q99999 423 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 HOXD1Q9GZZ0 328 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 SERHL2Q9H4I8 314 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 DUSP22Q9NRW4 184 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 DCAF16Q9NXF7 216 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 UBAP1Q9NZ09 502 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 GRHL1Q9NZI5 618 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 HERC2O95714 4834 aa7.45□□□□□ -1.22
TRAPPC9-212ENST00000521944 CLDN25C9JDP6 229 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 H3BNH8 94 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 DHHO43323 396 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 PIP5K1CO60331 668 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 HSPA4LO95757 839 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 OTCP00480 354 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 HMGN2P05204 90 aaKnown RBP7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 SBK3P0C264 359 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 UBL4AP11441 157 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF14P17017 642 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 CCNA2P20248 432 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 HSD17B3P37058 310 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 GDNFP39905 211 aa7.44□□□□□ -1.22
TRAPPC9-212ENST00000521944 FRKP42685 505 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms