RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 A8MXQ7 604 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 UGT1A9O60656 530 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 GLCEO94923 617 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CELF2O95319 508 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 EPOP01588 193 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 IGHG2P01859 326 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 IGHG4P01861 327 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 S100BP04271 92 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 APRTP07741 180 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 TPBGLP0DKB5 382 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 PSMA4P25789 261 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CHMLP26374 656 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 PSMB4P28070 264 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 LOXP28300 417 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CTNNB1P35222 781 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 HOXD13P35453 343 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 KCNJ2P63252 427 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 ARG2P78540 354 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 ZNF273Q14593 569 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 GINS1Q14691 196 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 KARSQ15046 597 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 COA6Q5JTJ3 125 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 BEND6Q5SZJ8 279 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CCDC30Q5VVM6 783 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CES3Q6UWW8 571 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 ACOT7LQ6ZUV0 252 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 LINC00173Q6ZV60 143 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 LYPD6Q86Y78 171 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CCAR2Q8N163 923 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 TMEM256Q8N2U0 113 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 UXS1Q8NBZ7 420 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 TSPAN14Q8NG11 270 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR6N1Q8NGY5 312 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 MS4A14Q96JA4 679 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR52B2Q96RD2 323 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 NAT10Q9H0A0 1025 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 UGT1A7Q9HAW7 530 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 UGT1A10Q9HAW8 530 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 UGT1A8Q9HAW9 530 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 MRPL17Q9NRX2 175 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 MRPL16Q9NX20 251 aaKnown RBP-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 B3GNT2Q9NY97 397 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 CTNNA3Q9UI47 895 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 PSORS1C1Q9UIG5 152 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 SLC7A11Q9UPY5 501 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 PSG8Q9UQ74 426 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 IKBKGQ9Y6K9 419 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 BAZ2BQ9UIF8 2168 aaKnown RBP-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PTPN13Q12923 2485 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PRAMEF26H0Y7S4 382 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 CLDN34H7C241 214 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 TM9SF1O15321 606 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 DPM1O60762 260 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 ETHE1O95571 254 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 TXNDC12O95881 172 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 GSTA2P09210 222 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 SPP1P10451 314 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 HPGDP15428 266 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 LBPP18428 481 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PAX7P23759 505 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 CD80P33681 288 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PRLHRP49683 370 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 ANAPC15P60006 121 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 SLC3A1Q07837 685 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 ATP6AP1Q15904 470 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 TPRXLQ17RH7 258 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 MPPE1Q53F39 396 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 RAB41Q5JT25 222 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 LIN9Q5TKA1 542 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 TMEM184AQ6ZMB5 413 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 ASRGL1Q7L266 308 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 IFNEQ86WN2 208 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 HEATR4Q86WZ0 1026 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 NAXEQ8NCW5 288 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR4L1Q8NH43 312 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PGAP3Q96FM1 320 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 HPDLQ96IR7 371 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 LINC00615Q96LM1 132 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 ZNF681Q96N22 645 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 SH3GL3Q99963 347 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 ECSITQ9BQ95 431 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 TMEM246Q9BRR3 403 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 NAT9Q9BTE0 207 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 LRRC2Q9BYS8 371 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 SELENOIQ9C0D9 397 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 LSG1Q9H089 658 aaKnown RBP-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 LRRC19Q9H756 370 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 SLC38A10Q9HBR0 1119 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PALMDQ9NP74 551 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 C8orf17Q9NRJ1 99 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 QPCTLQ9NXS2 382 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 MRTO4Q9UKD2 239 aaKnown RBP-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 PCDHGB4Q9UN71 923 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 GPR52Q9Y2T5 361 aa-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 SONP18583 2426 aaKnown RBP-2.32□□□□□ -2.78
RNU6-539P-201ENST00000516665 RNF213Q63HN8 5207 aa-2.33□□□□□ -2.78
RNU6-539P-201ENST00000516665 DENND4AQ7Z401 1863 aa-2.33□□□□□ -2.78
RNU6-539P-201ENST00000516665 CLUHO75153 1309 aa-2.33□□□□□ -2.78
RNU6-539P-201ENST00000516665 TRAV6A0A075B6T7 132 aa-2.33□□□□□ -2.78
RNU6-539P-201ENST00000516665 IGHV1OR15-9A0A0B4J2B8 117 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms