RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 NCR3LG1Q68D85 454 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 NIPAL3Q6P499 406 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 CBLN3Q6UW01 205 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 NTM-AS1Q6ZSK4 140 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 LINC00173Q6ZV60 143 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 NLRP9Q7RTR0 991 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 WDR86Q86TI4 376 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 RIMKLAQ8IXN7 391 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 LRRC43Q8N309 656 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 OR2L13Q8N349 312 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 OR4D9Q8NGE8 314 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 OR2G3Q8NGZ4 309 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 SLC13A3Q8WWT9 602 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 RGP1Q92546 391 aaPredicted RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 MRPS31Q92665 395 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 MRPL38Q96DV4 380 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 PDXPQ96GD0 296 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 SAMD8Q96LT4 415 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 CHAC1Q9BUX1 264 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 NXF5Q9H1B4 397 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 THAP9Q9H5L6 903 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 NCAPD2Q15021 1401 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 H0YHG0 523 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 CTAGE5O15320 804 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 RBFOX2O43251 390 aaKnown RBP eCLIP0.84□□□□□ -2.27
PDGFC-208ENST00000512711 LANCL1O43813 399 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 VPS26AO75436 327 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 CCNKO75909 580 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 VAMP5O95183 116 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 POLR2MP0CAP2 368 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 CCDC192P0DO97 292 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 HPGDP15428 266 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 OMGP23515 440 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 KIF5BP33176 963 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 GPM6AP51674 278 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 PLA2G16P53816 162 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 ESRRGP62508 458 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 TAF9Q16594 264 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 C1QTNF12Q5T7M4 302 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 TRIM69Q86WT6 500 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 NECAP1Q8NC96 275 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 CD300LFQ8TDQ1 290 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 RNF139Q8WU17 664 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 ACOT11Q8WXI4 607 aaPredicted RBP0.84□□□□□ -2.27
PDGFC-208ENST00000512711 AURKBQ96GD4 344 aaPredicted RBP0.84□□□□□ -2.27
PDGFC-208ENST00000512711 WFIKKN1Q96NZ8 548 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 RIOK2Q9BVS4 552 aaKnown RBP0.84□□□□□ -2.27
PDGFC-208ENST00000512711 RAB17Q9H0T7 212 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 MEAF6Q9HAF1 191 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 VAT1LQ9HCJ6 419 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 NUDT15Q9NV35 164 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.84□□□□□ -2.27
PDGFC-208ENST00000512711 TBK1Q9UHD2 729 aa0.84□□□□□ -2.27
PDGFC-208ENST00000512711 MRPS33Q9Y291 106 aaKnown RBP0.84□□□□□ -2.27
PDGFC-208ENST00000512711 SCN1AP35498 2009 aa0.84□□□□□ -2.28
PDGFC-208ENST00000512711 KDRP35968 1356 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 C12orf71A8MTZ7 269 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 VGLL3A8MV65 326 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 C16orf90A8MZG2 172 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 TRDCB7Z8K6 153 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 SGK1O00141 431 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 DDX39AO00148 427 aaKnown RBP0.83□□□□□ -2.28
PDGFC-208ENST00000512711 NEBLO76041 1014 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 BGLAPP02818 100 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 COX5AP20674 150 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 SOX6P35712 828 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 NAPAP54920 295 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 AP1B1Q10567 949 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 SLC25A52Q3SY17 297 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 HTR3CQ8WXA8 447 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 SEC22AQ96IW7 307 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 RPP21Q9H633 154 aaKnown RBP0.83□□□□□ -2.28
PDGFC-208ENST00000512711 WDR76Q9H967 626 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 POPDC2Q9HBU9 364 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 CTPS2Q9NRF8 586 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 GNG12Q9UBI6 72 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 SEC14L3Q9UDX4 400 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 IL19Q9UHD0 177 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 MGAT4BQ9UQ53 548 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 AK6Q9Y3D8 172 aaKnown RBP0.83□□□□□ -2.28
PDGFC-208ENST00000512711 MMACHCQ9Y4U1 282 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 ANKRD12Q6UB98 2062 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 ABCC9O60706 1549 aa0.83□□□□□ -2.28
PDGFC-208ENST00000512711 ZSWIM8A7E2V4 1837 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 SCN4AP35499 1836 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 IGHV3-66A0A0C4DH42 116 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 INS-IGF2F8WCM5 200 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 HIP1O00291 1037 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 OR1F1O43749 312 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 SSX5O60225 188 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 UGT1A9O60656 530 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 PFKFB2O60825 505 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CDRT1O95170 752 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ALDOBP05062 364 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ZDHHC11BP0C7U3 371 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 IGHV3-43DP0DP04 118 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 HLA-DPA1P20036 260 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 YWHABP31946 246 aaKnown RBP0.82□□□□□ -2.28
PDGFC-208ENST00000512711 DDOSTP39656 456 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 NCBP2P52298 156 aaKnown RBP eCLIP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms