RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GABARAPL3Q9BY60 117 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF69Q9UC07 566 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 NTN1O95631 604 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 DRD5P21918 477 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 YOD1Q5VVQ6 348 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 SLC25A25Q6KCM7 469 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TMPPEQ6ZT21 453 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 OR5J2Q8NH18 312 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 PDCD1LG2Q9BQ51 273 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF350Q9GZX5 532 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TP63Q9H3D4 680 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 BOKQ9UMX3 212 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 SATB2Q9UPW6 733 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 DLSTP36957 453 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 GP2P55259 537 aaKnown RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 SNRPGP62308 76 aaKnown RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 SPOCK1Q08629 439 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF628Q5EBL2 1059 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 PWWP2BQ6NUJ5 590 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 MISPQ8IVT2 679 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 GABARAPL1Q9H0R8 117 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 IGHV3-9P01782 118 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 CLUP10909 449 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 SLC2A5P22732 501 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 EVI2BP34910 448 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 ART1P52961 327 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 SIRPAP78324 504 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 P2RY14Q15391 338 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 C8orf82Q6P1X6 216 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TMEM52Q8NDY8 209 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 GPR119Q8TDV5 335 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF566Q969W8 418 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 WWTR1Q9GZV5 400 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 EVA1AQ9H8M9 152 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TMEM9BQ9NQ34 198 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TXNL4BQ9NX01 149 aaKnown RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 KLHL9Q9P2J3 617 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 CHRNA9Q9UGM1 479 aa12.91□□□□□ -0.34
TCOF1-207ENST00000504761 MCTS1Q9ULC4 181 aaKnown RBP12.91□□□□□ -0.34
TCOF1-207ENST00000504761 TBX19O60806 448 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 WNT1P04628 370 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 SCG5P05408 212 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 IFNGR1P15260 489 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 SLC26A5P58743 744 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 MRM1Q6IN84 353 aaKnown RBP12.9□□□□□ -0.34
TCOF1-207ENST00000504761 CNEP1R1Q8N9A8 125 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 GAB3Q8WWW8 586 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 BCL7BQ9BQE9 202 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-207ENST00000504761 SHISA8B8ZZ34 492 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 EIF4E2O60573 245 aaKnown RBP12.9□□□□□ -0.34
TCOF1-207ENST00000504761 OR2T7P0C7T2 308 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 PUDPQ08623 228 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 SCRN3Q0VDG4 424 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 MEP1BQ16820 701 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 NIPAL3Q6P499 406 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 TIGD4Q8IY51 512 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 FAM26EQ8N5C1 309 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 OR2T27Q8NH04 317 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 WBP4O75554 376 aaKnown RBP12.9□□□□□ -0.34
TCOF1-207ENST00000504761 TNFSF15O95150 251 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 RAB11BQ15907 218 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 MINDY2Q8NBR6 621 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-207ENST00000504761 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 KCND3Q9UK17 655 aa12.9□□□□□ -0.34
TCOF1-207ENST00000504761 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 C5orf51A6NDU8 294 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 C4orf47A7E2U8 309 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 NKX2-2O95096 273 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 CBX7O95931 251 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 SBK2P0C263 348 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 E2F1Q01094 437 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 MORN4Q8NDC4 146 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 OR6Q1Q8NGQ2 317 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 DCBLD2Q96PD2 775 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.35
TCOF1-207ENST00000504761 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 S100GP29377 79 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 DBPQ10586 325 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 STK11Q15831 433 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 EXT1Q16394 746 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 FOXRED2Q8IWF2 684 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 APMAPQ9HDC9 416 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 ZFC3H1O60293 1989 aaKnown RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF432O94892 652 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 CCL4P13236 92 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 CD46P15529 392 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms