RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GNPDA1P46926 289 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 CDC34P49427 236 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 DNA2P51530 1060 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 CLDN18P56856 261 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PROK1P58294 105 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 RPL27P61353 136 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 B2MP61769 119 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TUBA1BP68363 451 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 NTHL1P78549 312 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 CDKL1Q00532 357 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 KLRB1Q12918 225 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TRAF3Q13114 568 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLAMF1Q13291 335 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF234Q14588 700 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PTGR1Q14914 329 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TRIP6Q15654 476 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 UBE2V2Q15819 145 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC25A52Q3SY17 297 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 SOHLH1Q5JUK2 328 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PXDC1Q5TGL8 231 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PAPD7Q5XG87 772 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C22orf42Q6IC83 251 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C1orf94Q6P1W5 598 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 BTNL3Q6UXE8 466 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 Q6ZTK2 550 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TUBA1AQ71U36 451 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 UTS2BQ765I0 119 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ASCL5Q7RTU5 278 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PID1Q7Z2X4 250 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ABHD12BQ7Z5M8 362 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 RANBP3LQ86VV4 465 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 MARCH9Q86YJ5 346 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 RNF113BQ8IZP6 322 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 LINC01561Q8N1V8 128 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C17orf78Q8N4C9 275 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 CSNK1A1LQ8N752 337 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TCEANCQ8N8B7 351 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF781Q8N8C0 355 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 B3GNT7Q8NFL0 401 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 OR8J2Q8NGG1 315 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PPTC7Q8NI37 304 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF461Q8TAF7 563 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 UBA3Q8TBC4 463 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 MAGEC3Q8TD91 643 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 HSD17B8Q92506 261 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TXNDC15Q96J42 360 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PLEKHA8Q96JA3 519 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 CEP170P1Q96L14 293 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C3orf30Q96M34 536 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 NAPGQ99747 312 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 TMEM121Q9BTD3 319 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 LRRC1Q9BTT6 524 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 QTRT1Q9BXR0 403 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PRSS22Q9GZN4 317 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 COMMD4Q9H0A8 199 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C3orf14Q9HBI5 128 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 SAMSN1Q9NSI8 373 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 DUS2Q9NX74 493 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 RBAKQ9NYW8 714 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C11orf21Q9P2W6 132 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 CLN8Q9UBY8 286 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 MRM2Q9UI43 246 aaKnown RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ING1Q9UK53 422 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 AMDHD2Q9Y303 409 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 PEX16Q9Y5Y5 336 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 HS3ST3B1Q9Y662 390 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 ALG6Q9Y672 507 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 COL4A6Q14031 1691 aa3.74□□□□□ -1.81
HMGB1P21-201ENST00000502313 C5orf42Q9H799 3197 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 BRWD1Q9NSI6 2320 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NCANO14594 1321 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TRBV4-1A0A0J9YWV2 114 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TMEM272A0A1B0GTI8 110 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 A0A1W2PNV4 684 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 MYMKA6NI61 221 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 LILRA5A6NI73 299 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF233A6NK53 670 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 E5RJQ4 531 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCSO14618 274 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 RGS16O15492 202 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TRAPPC3O43617 180 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 FCN3O75636 299 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PDE5AO76074 875 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CLDN14O95500 239 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 LATS1O95835 1130 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TSPAN13O95857 204 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 IGSF6O95976 241 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TIMP1P01033 207 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 STSP08842 583 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NR2C1P13056 603 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF26P17031 533 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ITGA2P17301 1181 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PMCHP20382 165 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 IMPDH1P20839 514 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 AADACP22760 399 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 GCAP28676 217 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NPBWR2P48146 333 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 FHITP49789 147 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 GAS1P54826 345 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms