RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PPM1FP49593 454 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-204ENST00000501271 CCR6P51684 374 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 IL10RAQ13651 578 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF684Q5T5D7 378 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 HES5Q5TA89 166 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 COL13A1Q5TAT6 717 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-204ENST00000501271 DEFB119Q8N690 84 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 C10orf53Q8N6V4 93 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 EXD3Q8N9H8 876 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 LSM14AQ8ND56 463 aaKnown RBP8.99□□□□□ -0.97
CLIP1-204ENST00000501271 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF671Q8TAW3 534 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 PHOSPHO1Q8TCT1 267 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 TRAF4Q9BUZ4 470 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-204ENST00000501271 TPSD1Q9BZJ3 242 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 SOHLH2Q9NX45 425 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 PRODH2Q9UF12 536 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 TEKT2Q9UIF3 430 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 GMEB2Q9UKD1 530 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 HIF3AQ9Y2N7 669 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ALPK2Q86TB3 2170 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF879B4DU55 563 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 DCTN6O00399 190 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 GPRIN2O60269 458 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 DHFRP00374 187 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 MT-ND4P03905 459 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 F13BP05160 661 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 GRK6P43250 576 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 SLC37A1P57057 533 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 PITPNAQ00169 270 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 HSF2Q03933 536 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 LTBQ06643 244 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 MRPL28Q13084 256 aaKnown RBP8.98□□□□□ -0.97
CLIP1-204ENST00000501271 UBE2NLQ5JXB2 153 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 FAM199XQ6PEV8 388 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-204ENST00000501271 JAZF1Q86VZ6 243 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF440Q8IYI8 595 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 CMTM4Q8IZR5 234 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 GRPEL2Q8TAA5 225 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 PTPMT1Q8WUK0 201 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-204ENST00000501271 DEDD2Q8WXF8 326 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 GCDHQ92947 438 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-204ENST00000501271 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 SLC38A3Q99624 504 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 NXF5Q9H1B4 397 aaKnown RBP8.98□□□□□ -0.97
CLIP1-204ENST00000501271 TSPAN10Q9H1Z9 355 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-204ENST00000501271 MED28Q9H204 178 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 MMP25Q9NPA2 562 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 NANSQ9NR45 359 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 UBQLN4Q9NRR5 601 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 RXFP3Q9NSD7 469 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 SLCO1C1Q9NYB5 712 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 PLCL2Q9UPR0 1127 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 CAMK2AQ9UQM7 478 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 HSPB11Q9Y547 144 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 NUBP2Q9Y5Y2 271 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 SEC16AO15027 2179 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 RP1P56715 2156 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 PCNX3Q9H6A9 2034 aa8.98□□□□□ -0.97
CLIP1-204ENST00000501271 TMEM72A0PK05 275 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 A8MUA0 341 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 H7C1C5 153 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 FABP7O15540 132 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 OR2B3O76000 313 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 RPP14O95059 124 aaKnown RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 CD14P08571 375 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ASAH2BP0C7U1 165 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 OR8G3PP0DMU2 310 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 PNMTP11086 282 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 HPGDP15428 266 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 PRKCAP17252 672 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 CTXN1P60606 82 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 LCN6P62502 163 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 KLF9Q13886 244 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 KCNAB1Q14722 419 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ALG10Q5BKT4 473 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 STPG1Q5TH74 334 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 LMX1AQ8TE12 382 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SMIM4Q8WVI0 70 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SLC25A38Q96DW6 304 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SLX1AQ9BQ83 275 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 CACNG6Q9BXT2 260 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 RTN4RQ9BZR6 473 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 NDEL1Q9GZM8 345 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 PNO1Q9NRX1 252 aaKnown RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 LANCL2Q9NS86 450 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF281Q9Y2X9 895 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 COL5A1P20908 1838 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 TRABD2BA6NFA1 517 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 IFITM5A6NNB3 132 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 C17orf51A8MQB3 221 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 AIPO00170 330 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SCDO00767 359 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF264O43296 627 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 GSTZ1O43708 216 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 GMFGO60234 142 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 UTS2O95399 124 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 IL33O95760 270 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms