RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PIK3IP1Q96FE7 263 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF385AQ96PM9 386 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 MCHR1Q99705 422 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 ECSITQ9BQ95 431 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 TACO1Q9BSH4 297 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 TRIM2Q9C040 744 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 MRGBPQ9NV56 204 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 EMC3Q9P0I2 261 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 RPS6KB2Q9UBS0 482 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 ST6GALNAC2Q9UJ37 374 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 PLEKHA6Q9Y2H5 1048 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 NOSIPQ9Y314 301 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 MTORP42345 2549 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 A0A087WUJ7 227 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 GMNCA6NCL1 334 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 FAM220BPB1ANY3 271 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 LRRN3E7EW58 273 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 DYNC1I1O14576 645 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 CASKO14936 926 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 GSC2O15499 205 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 KLF4O43474 513 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 EIF1BO60739 113 aaKnown RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 CCDC22O60826 627 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 RAD51DO75771 328 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 AHSA1O95433 338 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 PLAUP00749 431 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 NPPAP01160 153 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 ITGA5P08648 1049 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 PNMTP11086 282 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 FUT4P22083 530 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 IL32P24001 234 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 NUDT2P50583 147 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 MAP2K6P52564 334 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC7A2P52569 658 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 IST1P53990 364 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 LIPEQ05469 1076 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 LTBQ06643 244 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 ITGADQ13349 1161 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 TESK1Q15569 626 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 TAB1Q15750 504 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 LRRC23Q53EV4 343 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 ENTPD8Q5MY95 495 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 C9orf135Q5VTT2 229 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 FBXW9Q5XUX1 488 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 C8orf82Q6P1X6 216 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 ULK3Q6PHR2 472 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 PAMR1Q6UXH9 720 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 BHLHA15Q7RTS1 189 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 CPLX4Q7Z7G2 160 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 RANBP3LQ86VV4 465 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 WDFY1Q8IWB7 410 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC30A8Q8IWU4 369 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC15A3Q8IY34 581 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 MICU2Q8IYU8 434 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 UBE2J2Q8N2K1 259 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 PCYOX1LQ8NBM8 494 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 OR2T12Q8NG77 320 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 MFSD8Q8NHS3 518 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 RP9Q8TA86 221 aaKnown RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 STK35Q8TDR2 534 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC26A7Q8TE54 656 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 DNAJA4Q8WW22 397 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 KISS1RQ969F8 398 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC38A4Q969I6 547 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 MOGAT1Q96PD6 335 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SH3GL1Q99961 368 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 NAA11Q9BSU3 229 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC7A10Q9NS82 523 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 CCM2LQ9NUG4 571 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-209ENST00000487244 GID8Q9NWU2 228 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF226Q9NYT6 803 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 B3GAT1Q9P2W7 334 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 MALT1Q9UDY8 824 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 GPR52Q9Y2T5 361 aa6.31□□□□□ -1.4
UBE4B-209ENST00000487244 TRAV36DV7A0A075B6V5 113 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 A0A1W2PR80 420 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 PDLIM1O00151 329 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 KPNA4O00629 521 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 GPR171O14626 319 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 FMO6PO60774 539 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 FZD7O75084 574 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 MRPL33O75394 65 aaKnown RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 ATE1O95260 518 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 HPRP00739 348 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 BGLAPP02818 100 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 C8BP07358 591 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 HLA-DOBP13765 273 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 PPP3CBP16298 524 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 GRPRP30550 384 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 OR1E2P47887 323 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 GSK3BP49841 420 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 SELENOPP49908 381 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 SLC25A3Q00325 362 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 FAPQ12884 760 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 FOXD4Q12950 439 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 VEZF1Q14119 521 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 P2RY6Q15077 328 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms