RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	GDI1	P31150	447 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	MAGEA8	P43361	318 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	OC90	Q02509	493 aa	Predicted RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	CHRNB3	Q05901	458 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	ASPH	Q12797	758 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	ELAVL3	Q14576	367 aa	Known RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	LPAL2	Q16609	132 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	KLHL38	Q2WGJ6	581 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	SLC25A52	Q3SY17	297 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	ZNF57	Q68EA5	555 aa	Predicted RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	OR5M10	Q6IEU7	315 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	DNM1P46	Q6ZS02	220 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	GPRIN3	Q6ZVF9	776 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	GDPD3	Q7L5L3	318 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	TIPARP	Q7Z3E1	657 aa	Known RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	KIR3DL3	Q8N743	410 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	OR6T1	Q8NGN1	323 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	SLC2A14	Q8TDB8	520 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	AGAP11	Q8TF27	550 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	HTR3C	Q8WXA8	447 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	RASD2	Q96D21	266 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	IFT74	Q96LB3	600 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	NPY6R	Q99463	290 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	APOL2	Q9BQE5	337 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	SLITRK2	Q9H156	845 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	AZI2	Q9H6S1	392 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	GNB4	Q9HAV0	340 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	MYOZ2	Q9NPC6	264 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	ETNK2	Q9NVF9	386 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	CLEC5A	Q9NY25	188 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	SUN2	Q9UH99	717 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	ADAM28	Q9UKQ2	775 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	KLK13	Q9UKR3	277 aa		3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	AK6	Q9Y3D8	172 aa	Known RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	DSP	P15924	2871 aa	Known RBP	3.03	□□□□□ -1.92
VPS8-223	ENST00000485024	CACNA1S	Q13698	1873 aa		3.03	□□□□□ -1.93
VPS8-223	ENST00000485024	ITGB4	P16144	1822 aa		3.03	□□□□□ -1.93
VPS8-223	ENST00000485024	AFDN	P55196	1824 aa	Known RBP	3.03	□□□□□ -1.93
VPS8-223	ENST00000485024	ANKRD50	Q9ULJ7	1429 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	NF1	P21359	2839 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ROCK1	Q13464	1354 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TRAV9-2	A0A087WT02	112 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	MED7	O43513	233 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CXCL13	O43927	109 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TIMM8A	O60220	97 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SRPX2	O60687	465 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	HCN1	O60741	890 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC2A10	O95528	541 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	LALBA	P00709	142 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CA1	P00915	261 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ALOX5	P09917	674 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TROVE2	P10155	538 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	LAMP1	P11279	417 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CYP2B6	P20813	491 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	IGHV1-2	P23083	117 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	MMP11	P24347	488 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	FGF9	P31371	208 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	RDX	P35241	583 aa	Known RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	UGT1A5	P35504	534 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CASP4	P49662	377 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SUCLG1	P53597	346 aa	Known RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CRYBB1	P53674	252 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC8A3	P57103	927 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	MRPS11	P82912	194 aa	Known RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	OGDH	Q02218	1023 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SERTAD2	Q14140	314 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	PPP1R7	Q15435	360 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	GLYR1	Q49A26	553 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CTSL3P	Q5NE16	218 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	PRAMEF5	Q5TYX0	476 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	PRAMEF6	Q5VXH4	476 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF343	Q6P1L6	599 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CCDC137	Q6PK04	289 aa	Known RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	METAP1D	Q6UB28	335 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ZYG11A	Q6WRX3	759 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF497	Q6ZNH5	498 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	PAQR7	Q86WK9	346 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	APOBEC3F	Q8IUX4	373 aa	Known RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	C9orf40	Q8IXQ3	194 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	POM121L12	Q8N7R1	296 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	MFSD9	Q8NBP5	474 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	OR2T33	Q8NG76	320 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	AKR7L	Q8NHP1	331 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ADAMTS16	Q8TE57	1224 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	RNF139	Q8WU17	664 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CLCC1	Q96S66	551 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SOST	Q9BQB4	213 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	DPH7	Q9BTV6	452 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TM2D1	Q9BX74	207 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TSSK1B	Q9BXA7	367 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	SPATA16	Q9BXB7	569 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	UBXN6	Q9BZV1	441 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	MAGT1	Q9H0U3	335 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ISG20L2	Q9H9L3	353 aa	Known RBP	3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	CAB39L	Q9H9S4	337 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	IL36G	Q9NZH8	169 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	BFAR	Q9NZS9	450 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	PHF11	Q9UIL8	331 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	RAB23	Q9ULC3	237 aa		3.02	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms