RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PRKCAP17252 672 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 NR4A1P22736 598 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 MST1P26927 711 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 GTF2E2P29084 291 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 IDUAP35475 653 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 AQP2P41181 271 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ETV6P41212 452 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 SOX3P41225 446 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ENTPD1P49961 510 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 GBX2P52951 348 aaPredicted RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 SLC16A1P53985 500 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 MLLT10P55197 1068 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 CTXN1P60606 82 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 RAP1BP61224 184 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 LSM3P62310 102 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 RAP1AP62834 184 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 RPS15P62841 145 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 RPL18Q07020 188 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 KRR1Q13601 381 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 LPAL2Q16609 132 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ZNF791Q3KP31 576 aaPredicted RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 C1orf140Q5VVS0 124 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 LIPKQ5VXJ0 399 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 SLC6A19Q695T7 634 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 C16orf87Q6PH81 154 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 PRR23CQ6ZRP0 262 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 RAB11FIP2Q7L804 512 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 GLRX5Q86SX6 157 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 LHFPL3Q86UP9 236 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ADGRG3Q86Y34 549 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 SIRT6Q8N6T7 355 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ADPRHL1Q8NDY3 354 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ATP6V1C2Q8NEY4 427 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 BBS1Q8NFJ9 593 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 OR10H4Q8NGA5 316 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 OR4F15Q8NGB8 312 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 OR4K13Q8NH42 304 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 GATAD2BQ8WXI9 593 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 SMPDL3BQ92485 455 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ZBTB8AQ96BR9 441 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 C1GALT1C1Q96EU7 318 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 IP6K3Q96PC2 410 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 RASL10BQ96S79 203 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ZNF649Q9BS31 505 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 CENPOQ9BU64 300 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 KATNB1Q9BVA0 655 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 NUAK2Q9H093 628 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 EXOSC4Q9NPD3 245 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 FANCFQ9NPI8 374 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 AKIP1Q9NQ31 210 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 INIPQ9NRY2 104 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 KLRF1Q9NZS2 232 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 B3GALT5Q9Y2C3 310 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 SF3B6Q9Y3B4 125 aaKnown RBP7.2□□□□□ -1.26
VMA21-203ENST00000477649 WIF1Q9Y5W5 379 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 B3GALT1Q9Y5Z6 326 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 HS3ST3B1Q9Y662 390 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 RP1P56715 2156 aa7.2□□□□□ -1.26
VMA21-203ENST00000477649 A0A1W2PRG6 482 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 ISPDA4D126 451 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 LOC110117498-PIK3R3F6TDL0 507 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 CDX4O14627 284 aaPredicted RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 ADAM10O14672 748 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 GNB5O14775 395 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 PLPP2O43688 288 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 GPRIN2O60269 458 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 OR2J2O76002 312 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TACSTD2P09758 323 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 COX6A1P12074 109 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 ZNF28P17035 718 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 SPI1P17947 270 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 CD82P27701 267 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 DAP3P51398 398 aaKnown RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 SSR4P51571 173 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 PPP5CP53041 499 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 FBXW4P57775 412 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 ERVK-25P63136 954 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 CHAF1BQ13112 559 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 GLYR1Q49A26 553 aaPredicted RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 CDONQ4KMG0 1287 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 OR2G6Q5TZ20 316 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 FAM69BQ5VUD6 431 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 LCN10Q6JVE6 187 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 JMJD6Q6NYC1 403 aaPredicted RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 DNM1P34Q6PK57 102 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 PLEKHG7Q6ZR37 379 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TRILQ7L0X0 811 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 SLC16A9Q7RTY1 509 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TPRA1Q86W33 373 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 LRRC17Q8N6Y2 441 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 ARIH2OSQ8N7S6 290 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 FADS6Q8N9I5 356 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TEX19Q8NA77 164 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 MOSPD2Q8NHP6 518 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 FNDC8Q8TC99 324 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 SPRYD4Q8WW59 207 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms