RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ASXL3Q9C0F0 2248 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 IGHV3-20A0A0C4DH32 117 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 NAP1L6A6NFF2 107 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 MED6O75586 246 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 DDAH2O95865 285 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SNRNP70P08621 437 aaKnown RBP10.17□□□□□ -0.78
VAPB-204ENST00000475243 PKLRP30613 574 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 PRKAR1BP31321 381 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 YPEL5P62699 121 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 MC2RQ01718 297 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 C17orf67Q0P5P2 114 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SLC36A2Q495M3 483 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CGB2Q6NT52 195 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 DHRS4Q9BTZ2 278 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 NRSN2Q9GZP1 204 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ZNF286AQ9HBT8 521 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 C19orf12Q9NSK7 152 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 PGAP2Q9UHJ9 254 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 OSGIN1Q9UJX0 560 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 A0A1W2PS29 197 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 K7ESM1 405 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ARNTLO00327 626 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CTDSP2O14595 271 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CSNK1DP48730 415 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 KCNAB1Q14722 419 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 BHLHE23Q8NDY6 225 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 TMEM255BQ8WV15 326 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ZNF597Q96LX8 424 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ZNF578Q96N58 590 aaPredicted RBP10.17□□□□□ -0.78
VAPB-204ENST00000475243 METTL9Q9H1A3 318 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CDCP1Q9H5V8 836 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 FURINP09958 794 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CHATP28329 748 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 F2RL1P55085 397 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 GPR19Q15760 415 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ZNF836Q6ZNA1 936 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 PRICKLE2Q7Z3G6 844 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 GLIPR2Q9H4G4 154 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SLA2Q9H6Q3 261 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CPNE5Q9HCH3 593 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 HOXA1P49639 335 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 MLLT11Q13015 90 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 SEMA3BQ13214 749 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 TATDN3Q17R31 274 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CCSMST1Q4G0I0 132 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 HSF5Q4G112 596 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 BCL7AQ4VC05 210 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 MARCH3Q86UD3 253 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 GFOD1Q9NXC2 390 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 GNG12Q9UBI6 72 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 SERINC4A6NH21 518 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 PMP2P02689 132 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 KLKB1P03952 638 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 GSTP1P09211 210 aaKnown RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 MRPS34P82930 218 aaKnown RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 ZNF91Q05481 1191 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ALKAL1Q6UXT8 129 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CCDC71Q8IV32 467 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 ST7LQ8TDW4 575 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 RAB3CQ96E17 227 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ACSS1Q9NUB1 689 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 ZNF749O43361 778 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ABHD16AO95870 558 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 BLVRBP30043 206 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 GIPRP48546 466 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 TRIM61Q5EBN2 209 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 OR13C9Q8NGT0 318 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 UBXN10Q96LJ8 280 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ARNT2Q9HBZ2 717 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 FGF21Q9NSA1 209 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ANKRD36CQ5JPF3 1778 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ZNF705GA8MUZ8 300 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 P2RY10O00398 339 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 TP53P04637 393 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 NUDT1P36639 197 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 DCAF7P61962 342 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 TSPAN31Q12999 210 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 R3HDMLQ9H3Y0 253 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CXorf36Q9H7Y0 433 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 C17orf113A0A1B0GUU1 675 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CYB5BO43169 146 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 DPP4P27487 766 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 RPS25P62851 125 aaKnown RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CST9Q5W186 159 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 RPL3LQ92901 407 aaKnown RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 OCSTAMPQ9BR26 566 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 C1QTNF6Q9BXI9 259 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 SLC25A31Q9H0C2 315 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 SLC22A7Q9Y694 548 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 IMPA2O14732 288 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 MSTNO14793 375 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 SHC1P29353 583 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 EDDM3BP56851 147 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 HSD17B7P56937 341 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 SORDQ00796 357 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 HBMQ6B0K9 141 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 PAPD4Q6PIY7 484 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms