RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 NRMQ8IXM6 262 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 RELL2Q8NC24 303 aaPredicted RBP17.77■□□□□ 0.44
SF1-213ENST00000472725 OR9K2Q8NGE7 335 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 OR2T29Q8NH02 315 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 PFN4Q8NHR9 129 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 TMEM45BQ96B21 275 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 RSRC1Q96IZ7 334 aaKnown RBP17.77■□□□□ 0.44
SF1-213ENST00000472725 TMCC3Q9ULS5 477 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 CLEC4AQ9UMR7 237 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 PROCRQ9UNN8 238 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 FLVCR1Q9Y5Y0 555 aa17.77■□□□□ 0.44
SF1-213ENST00000472725 SH3PXD2BA1X283 911 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 A8MXE2 369 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 PLPP3O14495 311 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 OR6A2O95222 327 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 CNOT4O95628 575 aaKnown RBP17.76■□□□□ 0.43
SF1-213ENST00000472725 RNF224P0DH78 156 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 IFI30P13284 250 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 ZNF43P17038 809 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 FUT1P19526 365 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 IFNGR2P38484 337 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 SIRPAP78324 504 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 PUDPQ08623 228 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 ZSCAN26Q16670 478 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 VWA1Q6PCB0 445 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 TMPRSS11FQ6ZWK6 438 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 PXKQ7Z7A4 578 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 ALPK1Q96QP1 1244 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 C20orf141Q9NUB4 165 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 NOSIPQ9Y314 301 aaKnown RBP17.76■□□□□ 0.43
SF1-213ENST00000472725 NOX1Q9Y5S8 564 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 DOPEY1Q5JWR5 2465 aa17.76■□□□□ 0.43
SF1-213ENST00000472725 FLNCQ14315 2725 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 TRBV4-1A0A0J9YWV2 114 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 MS4A18H0YCH9 400 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 RAMP1O60894 148 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 TSPAN19P0C672 248 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 FUT4P22083 530 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 PEX19P40855 299 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 LIMS1P48059 325 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 MS4A18Q3C1V0 323 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 CREB3L2Q70SY1 520 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 NANOGNBQ7Z5D8 188 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 GPAT4Q86UL3 456 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 OR4K5Q8NGD3 323 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 REEP1Q9H902 201 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 ELOVL5Q9NYP7 299 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 B3GAT1Q9P2W7 334 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 LYVE1Q9Y5Y7 322 aa17.75■□□□□ 0.43
SF1-213ENST00000472725 CACNA1CQ13936 2221 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 USP9XQ93008 2570 aaPredicted RBP17.74■□□□□ 0.43
SF1-213ENST00000472725 OR6C65A6NJZ3 312 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 FAM90A27PA6NNH2 459 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 EEF1E1-BLOC1S5C9J1V9 151 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 LRRN3E7EW58 273 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 TNFRSF11BO00300 401 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 EEF1E1O43324 174 aaKnown RBP17.74■□□□□ 0.43
SF1-213ENST00000472725 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
SF1-213ENST00000472725 FKBP6O75344 327 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 MRPL33O75394 65 aaKnown RBP17.74■□□□□ 0.43
SF1-213ENST00000472725 CST1P01037 141 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 PTNP21246 168 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 CBLP22681 906 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 OR3A2P47893 321 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 ACTR3P61158 418 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 CDSNQ15517 529 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 BEND4Q6ZU67 534 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 UEVLDQ8IX04 471 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 ANKK1Q8NFD2 765 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 OR52J3Q8NH60 311 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 RNASE6Q93091 150 aaKnown RBP17.74■□□□□ 0.43
SF1-213ENST00000472725 PSMG3-AS1Q96PY0 264 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 UCK2Q9BZX2 261 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 ARMC1Q9NVT9 282 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 RCE1Q9Y256 329 aa17.74■□□□□ 0.43
SF1-213ENST00000472725 HCFC1P51610 2035 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 EFCAB9A8MZ26 197 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 PIP5K1CO60331 668 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 SMNDC1O75940 238 aaKnown RBP eCLIP17.73■□□□□ 0.43
SF1-213ENST00000472725 ADORA3P0DMS8 318 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 SAGP10523 405 aaPredicted RBP17.73■□□□□ 0.43
SF1-213ENST00000472725 OMPP47874 163 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 TFF3Q07654 80 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 FOXD4Q12950 439 aaPredicted RBP17.73■□□□□ 0.43
SF1-213ENST00000472725 C1DQ13901 141 aaKnown RBP17.73■□□□□ 0.43
SF1-213ENST00000472725 CCNIQ14094 377 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 TAF11Q15544 211 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 TBPL2Q6SJ96 375 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 NUFIP2Q7Z417 695 aaKnown RBP17.73■□□□□ 0.43
SF1-213ENST00000472725 EPHX4Q8IUS5 362 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 LRRC17Q8N6Y2 441 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 ZIC4Q8N9L1 334 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 NDEL1Q9GZM8 345 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 TAS2R5Q9NYW4 299 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 DNAJB9Q9UBS3 223 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 SEC14L4Q9UDX3 406 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 HIF3AQ9Y2N7 669 aa17.73■□□□□ 0.43
SF1-213ENST00000472725 SAMHD1Q9Y3Z3 626 aaKnown RBP17.73■□□□□ 0.43
SF1-213ENST00000472725 SPTBN1Q01082 2364 aaKnown RBP17.73■□□□□ 0.43
SF1-213ENST00000472725 NPIPB13A6NJU9 1138 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms